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Latest (0.1.3) not compatible with new vtk

See original GitHub issue

What is the current behavior? The newest VTK release candidate (9.2.0rc1) is incompatible.
Please provide the steps to reproduce and if possible a minimal demo of the problem.

$ python -c "from brainspace.mesh.mesh_io import read_surface"

Traceback (most recent call last):
  File "<string>", line 1, in <module>
  File "/Users/mathiasg/.pyenv/versions/nipreps/lib/python3.10/site-packages/brainspace/mesh/__init__.py", line 1, in <module>
    from . import (array_operations, mesh_elements, mesh_correspondence,
  File "/Users/mathiasg/.pyenv/versions/nipreps/lib/python3.10/site-packages/brainspace/mesh/array_operations.py", line 22, in <module>
    from . import mesh_elements as me
  File "/Users/mathiasg/.pyenv/versions/nipreps/lib/python3.10/site-packages/brainspace/mesh/mesh_elements.py", line 16, in <module>
    from ..vtk_interface import wrap_vtk, serial_connect
  File "/Users/mathiasg/.pyenv/versions/nipreps/lib/python3.10/site-packages/brainspace/vtk_interface/__init__.py", line 1, in <module>
    from .wrappers.base import (wrap_vtk, unwrap_vtk, wrap_vtk_array,
  File "/Users/mathiasg/.pyenv/versions/nipreps/lib/python3.10/site-packages/brainspace/vtk_interface/wrappers/__init__.py", line 1, in <module>
    from .base import BSVTKObjectWrapper
  File "/Users/mathiasg/.pyenv/versions/nipreps/lib/python3.10/site-packages/brainspace/vtk_interface/wrappers/base.py", line 15, in <module>
    from .utils import call_vtk, get_vtk_methods, is_numpy_string, is_vtk_string
  File "/Users/mathiasg/.pyenv/versions/nipreps/lib/python3.10/site-packages/brainspace/vtk_interface/wrappers/utils.py", line 15, in <module>
    from vtk.util.vtkConstants import VTK_BIT, VTK_STRING, VTK_UNICODE_STRING
ImportError: cannot import name 'VTK_UNICODE_STRING' from 'vtk.util.vtkConstants' (/Users/mathiasg/.pyenv/versions/nipreps/lib/python3.10/site-packages/vtkmodules/util/vtkConstants.py)

What is the expected behavior? No error
Please tell us about your computing environment: macOS 12.4 Python 3.10 with vtk 9.2.0rc1, but extends down to py3.7

Issue Analytics

State:
Created a year ago
Comments:9 (7 by maintainers)

Top GitHub Comments

1reaction

ghisvailcommented, Jul 12, 2022

You’re welcome. Would be great to get a release to avoid installing from GitHub 🙏

1reaction

OualidBenkarimcommented, Jul 12, 2022

Yep, this should work fine now. Thanks @ghisvail

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