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decomposed activities not generated (version 1.0.17)

See original GitHub issue


I ran SigProfilerExtractor 1.0.17 on my data. After the process ended, I didn’t see any activities table under COSMIC_ID83_Decomposed_Solution. I guess it should generate Activities and Signatures folder as in ID83_De-Novo_Solution.

Decomposition folder only has

  • Decomposition_Plots
  • De_Novo_map_to_COSMIC_ID83.csv
  • ID83_Decomposition_Plots.pdf
  • Solution_Stats

ID83_De-Novo_Solution folder has Activities, Signatures and Solution_stats folder.

I was wondering if there is anything I am missing here?

Thank you.

Issue Analytics

  • State:closed
  • Created 3 years ago
  • Comments:7

github_iconTop GitHub Comments

mishugebcommented, Sep 2, 2020

Hi Venu, I am looking at the issue and will back to you soon.

mdbarnesUCSDcommented, Sep 16, 2020

Thanks @itsvenu and @leefall for bringing this up. I am looking into reproducing this error.

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