GetAllIncluding contains deleted contents

For example, there are entities,

public class User : Entity
{
    public string Name { get; set; }
    public List<UserPermission> Permissions { get; set; }
}

public class UserPermission : Entity. ISoftDelete
{
    public int UserId { get; set; }
    public string Permission { get; set; }
    public bool IsDeleted { get; set; }
}

Remove a permission from a user like this,

var perm = _permissionRepo.GetAll().First(p => p.UserId == 2 && p.Permission == "admin");
_permissionRepo.Delete(perm);  // let's say perm.Id == 3
CurrentUnitOfWork.SaveChanges();

Now,I get the user and his permissions,but the permissions contains deleted contents

var userAfter = _userRepo.GetAllIncluding(u => u.Permissions).First(u => u.Id == 2);  
//permission(3) appears  in userAfter.Permissions 

[acjh]

No repro for both: https://github.com/acjh/aspnetboilerplate/commit/cc50216d084b7f6c09f72a036976dd01053f2df4

[hikalkan]

Thank you @acjh for the repro.