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[BUG] cellfinder_view error: ModuleNotFoundError: No module named 'napari.qt'

See original GitHub issue

Describe the bug When I run “cellfinder_view”, it throws an error:

ModuleNotFoundError: No module named 'napari.qt'

To Reproduce Please enter full details of how to reproduce this bug.

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Log file

(cellfinder) C:\Users\7057mehrav>cellfinder_view
Traceback (most recent call last):
  File "c:\users\7057mehrav\appdata\local\continuum\anaconda3\envs\cellfinder\lib\runpy.py", line 193, in _run_module_as_main
    "__main__", mod_spec)
  File "c:\users\7057mehrav\appdata\local\continuum\anaconda3\envs\cellfinder\lib\runpy.py", line 85, in _run_code
    exec(code, run_globals)
  File "C:\Users\7057mehrav\AppData\Local\Continuum\anaconda3\envs\cellfinder\Scripts\cellfinder_view.exe\__main__.py", line 4, in <module>
  File "c:\users\7057mehrav\appdata\local\continuum\anaconda3\envs\cellfinder\lib\site-packages\neuro\visualise\viewer.py", line 23, in <module>
    from neuro.visualise.napari_tools.callbacks import display_brain_region_name
  File "c:\users\7057mehrav\appdata\local\continuum\anaconda3\envs\cellfinder\lib\site-packages\neuro\visualise\napari_tools\callbacks.py", line 3, in <module>
    from napari.qt.threading import thread_worker
ModuleNotFoundError: No module named 'napari.qt'

Desktop (please complete the following information):

  • Windows 10

I have updated cellfinder and made sure that napari and pyside2 are installed.

Issue Analytics

  • State:closed
  • Created 3 years ago
  • Comments:11 (5 by maintainers)

github_iconTop GitHub Comments

2reactions
chrytsicommented, Jun 13, 2020

I had the same error. Updating and explicitly installing the required dependencies didn’t help either. So I removed the virtual environment, created a new one, re-installed cellfinder from scratch and now it’s all good. 😃

0reactions
rdbcasillascommented, Jun 13, 2020

Nevermind, it worked. thank you! I will close this now.

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