Stuck on an issue?

Lightrun Answers was designed to reduce the constant googling that comes with debugging 3rd party libraries. It collects links to all the places you might be looking at while hunting down a tough bug.

And, if you’re still stuck at the end, we’re happy to hop on a call to see how we can help out.

Ensure that perses calculations can be resumed

See original GitHub issue

We’ve received reports that the perses calculations hang when trying to restart/resume.

We should make sure that perses calculations can be resumed by

  • adding unit tests to run one iteration and terminate, then resume via the API
  • also test the same via the CLI
  • also test early termination via SIGKILL during the startup phase to make sure the calculation is not left in an un-rerunnable state
  • test on our batch queue system
  • test on AWS

Issue Analytics

  • State:closed
  • Created 2 years ago
  • Comments:14 (14 by maintainers)

github_iconTop GitHub Comments

zhang-ivycommented, Jul 15, 2021

I’m on the way to the airport now and will be on vacation until 7/25, but I’ve slack messaged Mike the code to generate a htf for alanine dipeptide in vacuum

zhang-ivycommented, Jul 12, 2021

During our perses dev sync I think we had agreed on using a small molecule transformation for this test case because we wanted to match Relay’s applications as closely as possible. Alanine dipeptide in vacuum should be fine too – I think Mike already has a pickled htf alanine dipeptide in vacuum from debugging the repex cycling issue, but I can re-send a pickled htf tomorrow if you need @mikemhenry

Read more comments on GitHub >

github_iconTop Results From Across the Web

Perses Priorities · GitHub
Experiments with expanded ensembles to explore chemical space - Perses Priorities ... Create jupyter notebook for analyzing results of calculation.
Read more >
What is payroll processing? - ADP
It involves calculating total wage earnings, withholding deductions, filing payroll taxes and delivering payment. These steps can be accomplished manually, but ...
Read more >
8 Ways to Ensure Data Integrity - Vaisala
Your plan should state how quickly functions can be restored, as well as the probable impact of any data lost. Look for software...
Read more >
Attention to Detail: Definition and Examples |
Attention to detail skills for a resume. One way you can highlight your attention to detail is through a consistently-structured and error-free ...
Read more >
APICS OnVUE exam information // Pearson VUE
Be sure your computer and internet pass the pre-exam system test. ... You can begin the check-in process up to 30 minutes before...
Read more >

github_iconTop Related Medium Post

No results found

github_iconTop Related StackOverflow Question

No results found

github_iconTroubleshoot Live Code

Lightrun enables developers to add logs, metrics and snapshots to live code - no restarts or redeploys required.
Start Free

github_iconTop Related Reddit Thread

No results found

github_iconTop Related Hackernoon Post

No results found

github_iconTop Related Tweet

No results found

github_iconTop Related Post

No results found

github_iconTop Related Hashnode Post

No results found