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What other test systems should be added to perses.tests.testsystems?

See original GitHub issue

In #92, I introduced an alanine dipeptide test system that includes a ton of alanine-dipeptide goodness to make testing easier:

  • three environments: vacuum, implicit, explicit
  • SystemGenerators for all environments
  • initial Topology objects for all environments
  • initial positions for all environments
  • PointMutationProposalEngines for all environments
  • ThermodynamicStates for all environments
  • MCMCSamplers for all environments
  • ExpandedEnsembleSamplers for all environments
  • SAMSSamplers for all environments
  • a MultiTargetDesign test sampler

What other kinds of systems would be useful to prepare this way? Small, simple test systems we can use for quickly testing components would be useful here.

Issue Analytics

  • State:closed
  • Created 8 years ago
  • Comments:9 (7 by maintainers)

github_iconTop GitHub Comments

1reaction
pgrinawaycommented, Aug 11, 2016

Going to close this since we have a set of test systems.

0reactions
juliebehrcommented, Mar 23, 2016

Yep! Starting now

Read more comments on GitHub >

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