Stuck on an issue?

Lightrun Answers was designed to reduce the constant googling that comes with debugging 3rd party libraries. It collects links to all the places you might be looking at while hunting down a tough bug.

And, if you’re still stuck at the end, we’re happy to hop on a call to see how we can help out.

Case has no analysis date?

See original GitHub issue

2019-11-14 17:18:28,869 - scout.server.app - ERROR: Exception on /cust002 [GET] [in /home/hiseq.clinical/miniconda/envs/prod/lib/python3.6/site-packages/flask/app.py:1891]
Traceback (most recent call last):
 File "/home/hiseq.clinical/miniconda/envs/prod/lib/python3.6/site-packages/flask/app.py", line 2446, in wsgi_app
   response = self.full_dispatch_request()
 File "/home/hiseq.clinical/miniconda/envs/prod/lib/python3.6/site-packages/flask/app.py", line 1951, in full_dispatch_request
   rv = self.handle_user_exception(e)
 File "/home/hiseq.clinical/miniconda/envs/prod/lib/python3.6/site-packages/flask/app.py", line 1820, in handle_user_exception
   reraise(exc_type, exc_value, tb)
 File "/home/hiseq.clinical/miniconda/envs/prod/lib/python3.6/site-packages/flask/_compat.py", line 39, in reraise
   raise value
 File "/home/hiseq.clinical/miniconda/envs/prod/lib/python3.6/site-packages/flask/app.py", line 1949, in full_dispatch_request
   rv = self.dispatch_request()
 File "/home/hiseq.clinical/miniconda/envs/prod/lib/python3.6/site-packages/flask/app.py", line 1935, in dispatch_request
   return self.view_functions[rule.endpoint](**req.view_args)
 File "/home/hiseq.clinical/SERVER/apps/scout/git/scout/scout/server/utils.py", line 26, in decorated_function
   return render_template(template_name, **context)
 File "/home/hiseq.clinical/miniconda/envs/prod/lib/python3.6/site-packages/flask/templating.py", line 140, in render_template
   ctx.app,
 File "/home/hiseq.clinical/miniconda/envs/prod/lib/python3.6/site-packages/flask/templating.py", line 120, in _render
   rv = template.render(context)
 File "/home/hiseq.clinical/miniconda/envs/prod/lib/python3.6/site-packages/jinja2/asyncsupport.py", line 76, in render
   return original_render(self, *args, **kwargs)
 File "/home/hiseq.clinical/miniconda/envs/prod/lib/python3.6/site-packages/jinja2/environment.py", line 1008, in render
   return self.environment.handle_exception(exc_info, True)
 File "/home/hiseq.clinical/miniconda/envs/prod/lib/python3.6/site-packages/jinja2/environment.py", line 780, in handle_exception
   reraise(exc_type, exc_value, tb)
 File "/home/hiseq.clinical/miniconda/envs/prod/lib/python3.6/site-packages/jinja2/_compat.py", line 37, in reraise
   raise value.with_traceback(tb)
 File "/home/hiseq.clinical/SERVER/apps/scout/git/scout/scout/server/blueprints/cases/templates/cases/cases.html", line 285, in top-level template code
   <a href="{{ url_for('variant.sv_variant', institute_id=case.owner, case_name=case.display_name, variant_id=clinvar.local_id) }}" target="_blank">chr{{clinvar.chromosome}}:{{clinvar.breakpoint1}}_{{clinvar.var_type}}</a>
 File "/home/hiseq.clinical/SERVER/apps/scout/git/scout/scout/server/templates/layout_bs4.html", line 1, in top-level template code
   {% extends "bootstrap4.html" %}
 File "/home/hiseq.clinical/SERVER/apps/scout/git/scout/scout/server/templates/bootstrap4.html", line 18, in top-level template code
   {% block body %}
 File "/home/hiseq.clinical/SERVER/apps/scout/git/scout/scout/server/templates/bootstrap4.html", line 21, in block "body"
   {% block content %}
 File "/home/hiseq.clinical/SERVER/apps/scout/git/scout/scout/server/templates/layout_bs4.html", line 80, in block "content"
   {% block content_main %}{% endblock %}
 File "/home/hiseq.clinical/SERVER/apps/scout/git/scout/scout/server/blueprints/cases/templates/cases/cases.html", line 88, in block "content_main"
   <div class="table-responsive">{{ cases_table(group_name, case_group) }}</div>
 File "/home/hiseq.clinical/miniconda/envs/prod/lib/python3.6/site-packages/jinja2/runtime.py", line 574, in _invoke
   rv = self._func(*arguments)
 File "/home/hiseq.clinical/SERVER/apps/scout/git/scout/scout/server/blueprints/cases/templates/cases/cases.html", line 180, in template
   {{ case_row(case) }}
 File "/home/hiseq.clinical/miniconda/envs/prod/lib/python3.6/site-packages/jinja2/runtime.py", line 574, in _invoke
   rv = self._func(*arguments)
 File "/home/hiseq.clinical/SERVER/apps/scout/git/scout/scout/server/blueprints/cases/templates/cases/cases.html", line 220, in template
   {{ case.analysis_date.date() }}
jinja2.exceptions.UndefinedError: 'str object' has no attribute 'date'

Issue Analytics

State:
Created 4 years ago
Comments:14

Top GitHub Comments

1reaction

emiliaolcommented, Nov 14, 2019

Toppen, tack!

1reaction

emiliaolcommented, Nov 14, 2019

Funkar fint nu! Men det du säger är att om Scout hade varit uppdaterad på hasta när jag laddade upp caset med den här configen så hade det fungerat?

Top Results From Across the Web

Start Case Analysis Pro to Predict the Processing Time of Your ...

Specifically, this date is based on registered case data in Lawfully Case Tracker from December 1st, 2018 to present. We don't just pinpoint...

How to Brief a Case

A case brief is a dissection of a judicial opinion -- it contains a written ... Case briefing helps you acquire the skills...

Filing Motions To Resolve The Case Or Narrow Issues

Your deadline for filing a reply depends on which court your case is in. If you are in the district court, you can...

Analytic Implications and Management Strategies For Missing ...

Patients with missing data at one year may be missing for reasons unrelated to the outcome of interest (e.g., they changed their contact...

Analyze Data in Excel - Microsoft Support

Analyze Data doesn't currently support analyzing datasets over 1.5 million cells. There is currently no workaround for this. · String dates like "2017-01-01" ......