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Re-rendering locally fails

See original GitHub issue

Issue:

When trying to re-render the pickle5 feedstock locally, am running into the following error.

$ conda smithy rerender -c auto
No azure token. Create a token and
put it in ~/.conda-smithy/azure.token
INFO conda_smithy.configure_feedstock:get_cfp_file_path(1635): Downloading conda-forge-pinning-2020.05.20.21.21.18
INFO conda_smithy.configure_feedstock:get_cfp_file_path(1644): Extracing conda-forge-pinning to /var/folders/lw/whnppx9951323x027sfhl5mmglk2pt/T/tmp6jmzttdx
info/hash_input.json: Could not open info/hash_input.json
info/link.json: Could not open info/link.json
info/index.json: Could not open info/index.json
info/files: Could not open info/files
info/about.json: Could not open info/about.json
info/paths.json: Could not open info/paths.json
info/git: Could not open info/git
info/recipe/meta.yaml.template: Could not open info/recipe/meta.yaml.template
info/test/run_test.sh: Could not open info/test/run_test.sh
info/licenses/LICENSE.txt: Could not open info/licenses/LICENSE.txt
info/recipe/LICENSE.txt: Could not open info/recipe/LICENSE.txt
info/recipe/migrations/arch_rebuild.txt: Could not open info/recipe/migrations/arch_rebuild.txt
info/test/run_test.bat: Could not open info/test/run_test.bat
share/conda-forge/migrations/example.exyaml: Could not open share/conda-forge/migrations/example.exyaml
info/recipe/migrations/example.exyaml: Could not open info/recipe/migrations/example.exyaml
info/recipe/migrations/icu67.yaml: Could not open info/recipe/migrations/icu67.yaml
share/conda-forge/migrations/icu67.yaml: Could not open share/conda-forge/migrations/icu67.yaml
info/recipe/migrations/gdal31.yaml: Could not open info/recipe/migrations/gdal31.yaml
share/conda-forge/migrations/gdal31.yaml: Could not open share/conda-forge/migrations/gdal31.yaml
share/conda-forge/migrations/krb51171.yaml: Could not open share/conda-forge/migrations/krb51171.yaml
info/recipe/migrations/krb51171.yaml: Could not open info/recipe/migrations/krb51171.yaml
info/recipe/migrations/hdf51106.yaml: Could not open info/recipe/migrations/hdf51106.yaml
share/conda-forge/migrations/hdf51106.yaml: Could not open share/conda-forge/migrations/hdf51106.yaml
share/conda-forge/migrations/tiledb20.yaml: Could not open share/conda-forge/migrations/tiledb20.yaml
info/recipe/migrations/arpack37.yaml: Could not open info/recipe/migrations/arpack37.yaml
info/recipe/migrations/tiledb20.yaml: Could not open info/recipe/migrations/tiledb20.yaml
share/conda-forge/migrations/arpack37.yaml: Could not open share/conda-forge/migrations/arpack37.yaml
info/recipe/migrations/xrootd412.yaml: Could not open info/recipe/migrations/xrootd412.yaml
share/conda-forge/migrations/xrootd412.yaml: Could not open share/conda-forge/migrations/xrootd412.yaml
share/conda-forge/migrations/poppler087.yaml: Could not open share/conda-forge/migrations/poppler087.yaml
info/recipe/migrations/poppler087.yaml: Could not open info/recipe/migrations/poppler087.yaml
share/conda-forge/migrations/poppler088.yaml: Could not open share/conda-forge/migrations/poppler088.yaml
info/recipe/migrations/poppler088.yaml: Could not open info/recipe/migrations/poppler088.yaml
share/conda-forge/migrations/root_base6204.yaml: Could not open share/conda-forge/migrations/root_base6204.yaml
info/recipe/migrations/root_base6204.yaml: Could not open info/recipe/migrations/root_base6204.yaml
info/recipe/migrations/librdkafka14.yaml: Could not open info/recipe/migrations/librdkafka14.yaml
info/recipe/migrations/arrow_cpp0171.yaml: Could not open info/recipe/migrations/arrow_cpp0171.yaml
share/conda-forge/migrations/arrow_cpp0171.yaml: Could not open share/conda-forge/migrations/arrow_cpp0171.yaml
share/conda-forge/migrations/librdkafka14.yaml: Could not open share/conda-forge/migrations/librdkafka14.yaml
info/recipe/migrations/petsc313.yaml: Could not open info/recipe/migrations/petsc313.yaml
share/conda-forge/migrations/petsc313.yaml: Could not open share/conda-forge/migrations/petsc313.yaml
share/conda-forge/migrations/scotch609.yaml: Could not open share/conda-forge/migrations/scotch609.yaml
info/recipe/migrations/scotch609.yaml: Could not open info/recipe/migrations/scotch609.yaml
info/recipe/migrations/boost172.yaml: Could not open info/recipe/migrations/boost172.yaml
share/conda-forge/migrations/boost172.yaml: Could not open share/conda-forge/migrations/boost172.yaml
share/conda-forge/migrations/python38.yaml: Could not open share/conda-forge/migrations/python38.yaml
info/recipe/migrations/python38.yaml: Could not open info/recipe/migrations/python38.yaml
share/conda-forge/migrations/tiledb_loosen_pin.yaml: Could not open share/conda-forge/migrations/tiledb_loosen_pin.yaml
info/recipe/migrations/tiledb_loosen_pin.yaml: Could not open info/recipe/migrations/tiledb_loosen_pin.yaml
share/conda-forge/migrations/r400.yaml: Could not open share/conda-forge/migrations/r400.yaml
info/recipe/migrations/r400.yaml: Could not open info/recipe/migrations/r400.yaml
info/recipe/meta.yaml: Could not open info/recipe/meta.yaml
info/recipe/migrations/pypy.yaml: Could not open info/recipe/migrations/pypy.yaml
share/conda-forge/migrations/pypy.yaml: Could not open share/conda-forge/migrations/pypy.yaml
info/recipe/conda_build_config.yaml: Could not open info/recipe/conda_build_config.yaml
conda_build_config.yaml: Could not open conda_build_config.yaml
bsdtar: Error exit delayed from previous errors.
Traceback (most recent call last):
  File "/Users/jkirkham/miniconda/bin/conda-smithy", line 10, in <module>
    sys.exit(main())
  File "/Users/jkirkham/miniconda/lib/python3.7/site-packages/conda_smithy/cli.py", line 584, in main
    args.subcommand_func(args)
  File "/Users/jkirkham/miniconda/lib/python3.7/site-packages/conda_smithy/cli.py", line 391, in __call__
    self._call(args, tmpdir)
  File "/Users/jkirkham/miniconda/lib/python3.7/site-packages/conda_smithy/cli.py", line 402, in _call
    temporary_directory=temporary_directory,
  File "/Users/jkirkham/miniconda/lib/python3.7/site-packages/conda_smithy/configure_feedstock.py", line 1824, in main
    temporary_directory, r
  File "/Users/jkirkham/miniconda/lib/python3.7/site-packages/conda_smithy/configure_feedstock.py", line 1645, in get_cfp_file_path
    subprocess.check_call(["bsdtar", "-xf", dest], cwd=temporary_directory)
  File "/Users/jkirkham/miniconda/lib/python3.7/subprocess.py", line 363, in check_call
    raise CalledProcessError(retcode, cmd)
subprocess.CalledProcessError: Command '['bsdtar', '-xf', '/var/folders/lw/whnppx9951323x027sfhl5mmglk2pt/T/tmp6jmzttdx/conda-forge-pinning-2020.05.20.21.21.18.tar.bz2']' returned non-zero exit status 1.

Environment (conda list):
$ conda list
# packages in environment at /Users/jkirkham/miniconda:
#
# Name                    Version                   Build  Channel
alabaster                 0.7.12                     py_0    conda-forge
anaconda-client           1.7.2                      py_0    conda-forge
appnope                   0.1.0           py37hc8dfbb8_1001    conda-forge
attrs                     19.3.0                     py_0    conda-forge
babel                     2.8.0                      py_0    conda-forge
backcall                  0.1.0                      py_0    conda-forge
beautifulsoup4            4.9.1            py37hc8dfbb8_0    conda-forge
binutils                  1.0.1                         1    conda-forge
blinker                   1.4                        py_1    conda-forge
boolean.py                3.7                        py_0    conda-forge
brotlipy                  0.7.0           py37h9bfed18_1000    conda-forge
bzip2                     1.0.8                h0b31af3_2    conda-forge
ca-certificates           2020.4.5.1           hecc5488_0    conda-forge
cctools                   927.0.2              h5ba7a2e_4    conda-forge
certifi                   2020.4.5.1       py37hc8dfbb8_0    conda-forge
cffi                      1.14.0           py37h356ff06_0    conda-forge
chardet                   3.0.4           py37hc8dfbb8_1006    conda-forge
clyent                    1.2.2                      py_1    conda-forge
colorama                  0.4.3                      py_0    conda-forge
conda                     4.8.3            py37hc8dfbb8_1    conda-forge
conda-build               3.19.2           py37hc8dfbb8_2    conda-forge
conda-forge-pinning       2020.05.20.21.21.18               0    conda-forge
conda-package-handling    1.6.0            py37h9bfed18_2    conda-forge
conda-press               0.0.6            py37hc8dfbb8_1    conda-forge
conda-smithy              3.7.3                      py_0    conda-forge
cryptography              2.9.2            py37he655712_0    conda-forge
curl                      7.69.1               h2d98d24_0    conda-forge
dask                      2.9.2                    pypi_0    pypi
decorator                 4.4.2                      py_0    conda-forge
deprecated                1.2.10             pyh9f0ad1d_0    conda-forge
docutils                  0.16             py37hc8dfbb8_1    conda-forge
expat                     2.2.9                h4a8c4bd_2    conda-forge
filelock                  3.0.12             pyh9f0ad1d_0    conda-forge
gettext                   0.19.8.1          h46ab8bc_1002    conda-forge
git                       2.26.2          pl526hcc376a2_0    conda-forge
gitdb                     4.0.5                      py_0    conda-forge
gitpython                 3.1.2                      py_0    conda-forge
glob2                     0.7                        py_0    conda-forge
grayskull                 0.5.1                      py_0    conda-forge
icu                       67.1                 h4a8c4bd_0    conda-forge
idna                      2.9                        py_1    conda-forge
imagesize                 1.2.0                      py_0    conda-forge
importlib-metadata        1.6.0            py37hc8dfbb8_0    conda-forge
importlib_metadata        1.6.0                         0    conda-forge
importlib_resources       1.5.0            py37hc8dfbb8_0    conda-forge
ipython                   7.14.0           py37hc8dfbb8_0    conda-forge
ipython_genutils          0.2.0                      py_1    conda-forge
isodate                   0.6.0                      py_1    conda-forge
jedi                      0.17.0           py37hc8dfbb8_0    conda-forge
jinja2                    2.11.2             pyh9f0ad1d_0    conda-forge
jsonschema                3.2.0            py37hc8dfbb8_1    conda-forge
jupyter_core              4.6.3            py37hc8dfbb8_1    conda-forge
krb5                      1.17.1               h1752a42_0    conda-forge
lazyasd                   0.1.4                      py_1    conda-forge
ld64                      450.3                h3c32e8a_4    conda-forge
libarchive                3.4.0                h8912c15_2    conda-forge
libcurl                   7.69.1               hc0b9707_0    conda-forge
libcxx                    10.0.0               h1af66ff_2    conda-forge
libedit                   3.1.20170329      hcfe32e1_1001    conda-forge
libffi                    3.2.1             h4a8c4bd_1007    conda-forge
libiconv                  1.15              h0b31af3_1006    conda-forge
liblief                   0.9.0                h3e78482_1    conda-forge
libllvm9                  9.0.1                h7475705_1    conda-forge
libssh2                   1.9.0                h39bdce6_2    conda-forge
libxml2                   2.9.10               hc06c4ae_1    conda-forge
license-expression        1.2                        py_0    conda-forge
lz4-c                     1.8.3             h6de7cb9_1001    conda-forge
lzo                       2.10              h1de35cc_1000    conda-forge
markupsafe                1.1.1            py37h9bfed18_1    conda-forge
more-itertools            8.3.0                      py_0    conda-forge
msrest                    0.6.10                     py_0    conda-forge
nbformat                  5.0.6                      py_0    conda-forge
ncurses                   6.1               h0a44026_1002    conda-forge
oauthlib                  3.0.1                      py_0    conda-forge
openssl                   1.1.1g               h0b31af3_0    conda-forge
packaging                 20.4               pyh9f0ad1d_0    conda-forge
parso                     0.7.0              pyh9f0ad1d_0    conda-forge
pcre                      8.44                 h4a8c4bd_0    conda-forge
perl                      5.26.2            haec8ef5_1006    conda-forge
pexpect                   4.8.0            py37hc8dfbb8_1    conda-forge
pickleshare               0.7.5           py37hc8dfbb8_1001    conda-forge
pip                       20.1.1             pyh9f0ad1d_0    conda-forge
pkginfo                   1.5.0.1                    py_0    conda-forge
pluggy                    0.13.1           py37hc8dfbb8_1    conda-forge
progressbar2              3.51.3             pyh9f0ad1d_0    conda-forge
prompt-toolkit            3.0.5                      py_0    conda-forge
prompt_toolkit            3.0.5                         0    conda-forge
psutil                    5.7.0            py37h9bfed18_1    conda-forge
ptyprocess                0.6.0                   py_1001    conda-forge
py                        1.8.1                      py_0    conda-forge
py-lief                   0.9.0            py37h0ceac7d_1    conda-forge
pycosat                   0.6.3           py37h9bfed18_1004    conda-forge
pycparser                 2.20                       py_0    conda-forge
pycrypto                  2.6.1           py37h9bfed18_1004    conda-forge
pygithub                  1.51                       py_0    conda-forge
pygments                  2.6.1                      py_0    conda-forge
pyjwt                     1.7.1                      py_0    conda-forge
pyopenssl                 19.1.0                     py_1    conda-forge
pyparsing                 2.4.7              pyh9f0ad1d_0    conda-forge
pyrsistent                0.16.0           py37h9bfed18_0    conda-forge
pysocks                   1.7.1            py37hc8dfbb8_1    conda-forge
pytest                    5.4.2            py37hc8dfbb8_0    conda-forge
python                    3.7.6           h90870a6_5_cpython    conda-forge
python-dateutil           2.8.1                      py_0    conda-forge
python-libarchive-c       2.9                      py37_0    conda-forge
python-utils              2.4.0                      py_0    conda-forge
python_abi                3.7                     1_cp37m    conda-forge
pytz                      2020.1             pyh9f0ad1d_0    conda-forge
pyyaml                    5.3.1            py37h9bfed18_0    conda-forge
rapidfuzz                 0.8.2            py37ha1cc60f_0    conda-forge
readline                  8.0                  hcfe32e1_0    conda-forge
requests                  2.23.0             pyh8c360ce_2    conda-forge
requests-oauthlib         1.2.0                      py_0    conda-forge
ripgrep                   12.1.0               h0b31af3_0    conda-forge
ruamel.yaml               0.16.6           py37h9bfed18_1    conda-forge
ruamel.yaml.clib          0.2.0            py37h9bfed18_1    conda-forge
ruamel.yaml.jinja2        0.2.4                      py_1    conda-forge
ruamel_yaml               0.15.80         py37h9bfed18_1001    conda-forge
scrypt                    0.8.15           py37he655712_0    conda-forge
setproctitle              1.1.10          py37h9bfed18_1002    conda-forge
setuptools                46.4.0           py37hc8dfbb8_0    conda-forge
shyaml                    0.6.1                      py_0    conda-forge
six                       1.15.0             pyh9f0ad1d_0    conda-forge
smmap                     3.0.4              pyh9f0ad1d_0    conda-forge
snowballstemmer           2.0.0                      py_0    conda-forge
soupsieve                 2.0.1            py37hc8dfbb8_0    conda-forge
sphinx                    3.0.3                      py_0    conda-forge
sphinxcontrib-applehelp   1.0.2                      py_0    conda-forge
sphinxcontrib-devhelp     1.0.2                      py_0    conda-forge
sphinxcontrib-htmlhelp    1.0.3                      py_0    conda-forge
sphinxcontrib-jsmath      1.0.1                      py_0    conda-forge
sphinxcontrib-qthelp      1.0.3                      py_0    conda-forge
sphinxcontrib-serializinghtml 1.1.4                      py_0    conda-forge
sqlite                    3.30.1               h93121df_0    conda-forge
stdlib-list               0.6.0                    py37_0    conda-forge
tapi                      1000.10.8            ha1b3eb9_4    conda-forge
tk                        8.6.10               hbbe82c9_0    conda-forge
toolz                     0.10.0                     py_0    conda-forge
tqdm                      4.46.0             pyh9f0ad1d_0    conda-forge
traitlets                 4.3.3            py37hc8dfbb8_1    conda-forge
urllib3                   1.25.9                     py_0    conda-forge
vsts-python-api           0.1.22                     py_0    conda-forge
wcwidth                   0.1.9              pyh9f0ad1d_0    conda-forge
wheel                     0.34.2                     py_1    conda-forge
wrapt                     1.12.1           py37h9bfed18_1    conda-forge
xonsh                     0.9.18           py37hc8dfbb8_0    conda-forge
xz                        5.2.5                h0b31af3_0    conda-forge
yaml                      0.2.4                h0b31af3_0    conda-forge
zipp                      3.1.0                      py_0    conda-forge
zlib                      1.2.11            h0b31af3_1006    conda-forge
zstd                      1.4.4                hed8d7c8_2    conda-forge

Details about conda and system ( conda info ):
$ conda info

     active environment : base
    active env location : /Users/jkirkham/miniconda
            shell level : 1
       user config file : /Users/jkirkham/.condarc
 populated config files : /Users/jkirkham/.condarc
          conda version : 4.8.3
    conda-build version : 3.19.2
         python version : 3.7.6.final.0
       virtual packages : __osx=10.14.6
       base environment : /Users/jkirkham/miniconda  (writable)
           channel URLs : https://conda.anaconda.org/conda-forge/osx-64
                          https://conda.anaconda.org/conda-forge/noarch
                          https://repo.anaconda.com/pkgs/main/osx-64
                          https://repo.anaconda.com/pkgs/main/noarch
                          https://repo.anaconda.com/pkgs/r/osx-64
                          https://repo.anaconda.com/pkgs/r/noarch
          package cache : /Users/jkirkham/miniconda/pkgs
                          /Users/jkirkham/.conda/pkgs
       envs directories : /Users/jkirkham/miniconda/envs
                          /Users/jkirkham/.conda/envs
               platform : osx-64
             user-agent : conda/4.8.3 requests/2.23.0 CPython/3.7.6 Darwin/18.7.0 OSX/10.14.6
                UID:GID : 523832026:1019530959
             netrc file : None
           offline mode : False

cc @beckermr (as we discussed this yesterday and I’m still seeing it on the updated feedstock)

Issue Analytics

  • State:closed
  • Created 3 years ago
  • Comments:10 (10 by maintainers)

github_iconTop GitHub Comments

1reaction
jakirkhamcommented, May 27, 2020

I think it was already marked broken. Just had picked it up some point before it was marked broken and Conda never replaced it as it was a newer version (3.4.0 instead of 3.3.3).

1reaction
jakirkhamcommented, May 26, 2020

Was thinking it could be due to a bad libarchive. However based on local inspection it seems Matt and I are using the same version (down to the build string).

Edit: NVM it does seem to be due to a bad libarchive.

Read more comments on GitHub >

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