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AttributeError: module 'plantcv.plantcv' has no attribute 'visualize'

See original GitHub issue

I have been running PlantCV workflows over a flat directory of images. I recently upgraded PlantCV to Version 3.4.0 and am now experiencing an error with pcv.visualize.pseudocolor.

I have reviewed the latest VIS tutorial code (and made necessary modifications to my code) and get the following error:

Traceback (most recent call last): File "C:/Path/To/plantcv_pipeline.py", line 142, in <module> main() File "C:/Path/To/plantcv_pipeline.py", line 133, in main pseudocolored_img = pcv.visualize.pseudocolor(gray_img=s, obj=None, mask=mask, axes=True, colorbar=True, cmap='jet') AttributeError: module 'plantcv.plantcv' has no attribute 'visualize'

I cannot figure out what I am doing wrong here. Can you help?

Issue Analytics

State:
Created 4 years ago
Comments:14 (14 by maintainers)

Top GitHub Comments

1reaction

AdamDimechcommented, Jun 25, 2019

Thanks @HaleySchuhl! I am now getting all of the image output that I expect.

0reactions

HaleySchuhlcommented, Jun 25, 2019

Feel welcome to reopen with any additional questions/suggestions!

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