problems running stats with toil 3.15.0

doing a normal local toil with the --stats flag, but while trying to query the job_store while the run is still going i get:

$ toil stats runs/run_2018-04-23-16-45-17/job_store
tshikovski 2018-04-23 17:04:24,562 MainThread INFO toil.lib.bioio: Root logger is at level 'INFO', 'toil' logger at level 'INFO'.
tshikovski 2018-04-23 17:04:24,562 MainThread INFO toil.utils.toilStats: Parsed arguments
tshikovski 2018-04-23 17:04:24,562 MainThread INFO toil.utils.toilStats: Checking if we have files for toil
tshikovski 2018-04-23 17:04:24,562 MainThread INFO toil.utils.toilStats: Checked arguments
Traceback (most recent call last):
  File ".virtualenv/bin/toil", line 11, in <module>
    sys.exit(main())
  File "/home/gijs/Work/spiel/.virtualenv/local/lib/python2.7/site-packages/toil/utils/toilMain.py", line 34, in main
    module.main()
  File "/home/gijs/Work/spiel/.virtualenv/local/lib/python2.7/site-packages/toil/utils/toilStats.py", line 605, in main
    collatedStatsTag = processData(jobStore.config, stats)
  File "/home/gijs/Work/spiel/.virtualenv/local/lib/python2.7/site-packages/toil/utils/toilStats.py", line 547, in processData
    total_clock=stats.total_clock,
AttributeError: 'Expando' object has no attribute 'total_clock'

┆Issue is synchronized with this JIRA Story ┆Issue Number: TOIL-86

[gijzelaerr]

will test it tomorrow. I remember now, I have to install toil[azure] to get it working, although i dont use azure.

[gijzelaerr]

Im still experiencing this issue and indeed it has to to with that the job is not finished. There is a bug in the code. I’ll issue a PR.