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Cannot Install Dedupe on Mojave with XCode 10

See original GitHub issue

Hi guys,

When trying to install on MacOS Mojave using pip there is an error when building the wheel for fastcluster:

src/fastcluster_python.cpp:55:10: fatal error: 'cmath' file not found
    #include <cmath> // for std::abs, std::pow, std::sqrt
             ^~~~~~~
    1 warning and 1 error generated.
    error: command 'gcc' failed with exit status 1

It seems fastcluster 1.1.25 installs just fine but dedupe requires <1.1.25.

Issue Analytics

  • State:closed
  • Created 5 years ago
  • Comments:5 (1 by maintainers)

github_iconTop GitHub Comments

14reactions
ultronscommented, Jun 1, 2019

export CFLAGS=‘-stdlib=libc++’

1reaction
fgreggcommented, May 13, 2019

This should be reported on https://github.com/cran/fastcluster

Read more comments on GitHub >

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