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3.1.3: sphinx warnings `reference target not found`

See original GitHub issue

First of all currently it is not possible to use straight sphinx-build command to build documentation out of source tree

+ /usr/bin/sphinx-build -j48 -n -T -b man docs build/sphinx/man
Running Sphinx v5.2.2
/usr/lib/python3.8/site-packages/pkg_resources/__init__.py:123: PkgResourcesDeprecationWarning: 1.17.1-unknown is an invalid version and will not be supported in a future release
  warnings.warn(
making output directory... done
myst v0.18.0: MdParserConfig(commonmark_only=False, gfm_only=False, enable_extensions=['dollarmath', 'colon_fence'], disable_syntax=[], all_links_external=False, url_schemes=('http', 'https', 'mailto', 'ftp'), ref_domains=None, highlight_code_blocks=True, number_code_blocks=[], title_to_header=False, heading_anchors=None, heading_slug_func=None, footnote_transition=True, words_per_minute=200, sub_delimiters=('{', '}'), linkify_fuzzy_links=True, dmath_allow_labels=True, dmath_allow_space=True, dmath_allow_digits=True, dmath_double_inline=False, update_mathjax=True, mathjax_classes='tex2jax_process|mathjax_process|math|output_area')
myst-nb v0.16.0: NbParserConfig(custom_formats={}, metadata_key='mystnb', cell_metadata_key='mystnb', kernel_rgx_aliases={}, execution_mode='off', execution_cache_path='', execution_excludepatterns=(), execution_timeout=-1, execution_in_temp=False, execution_allow_errors=False, execution_raise_on_error=False, execution_show_tb=False, merge_streams=False, render_plugin='default', remove_code_source=False, remove_code_outputs=False, number_source_lines=False, output_stderr='show', render_text_lexer='myst-ansi', render_error_lexer='ipythontb', render_image_options={}, render_figure_options={}, render_markdown_format='commonmark', output_folder='build', append_css=True, metadata_to_fm=False)
Using jupyter-cache at: /home/tkloczko/rpmbuild/BUILD/emcee-3.1.3/build/sphinx/.jupyter_cache
building [mo]: targets for 0 po files that are out of date
building [man]: all manpages
updating environment: [new config] 15 added, 0 changed, 0 removed
reading sources... [100%] user/upgrade
WARNING: autodoc: failed to import function 'autocorr.integrated_time' from module 'emcee'; the following exception was raised:
No module named 'emcee'
WARNING: autodoc: failed to import function 'autocorr.function_1d' from module 'emcee'; the following exception was raised:
No module named 'emcee'
WARNING: autodoc: failed to import class 'backends.Backend' from module 'emcee'; the following exception was raised:
No module named 'emcee'
WARNING: autodoc: failed to import class 'backends.HDFBackend' from module 'emcee'; the following exception was raised:
No module named 'emcee'
WARNING: autodoc: failed to import class 'moves.RedBlueMove' from module 'emcee'; the following exception was raised:
No module named 'emcee'
WARNING: autodoc: failed to import class 'moves.StretchMove' from module 'emcee'; the following exception was raised:
No module named 'emcee'
WARNING: autodoc: failed to import class 'moves.WalkMove' from module 'emcee'; the following exception was raised:
No module named 'emcee'
WARNING: autodoc: failed to import class 'moves.KDEMove' from module 'emcee'; the following exception was raised:
No module named 'emcee'
WARNING: autodoc: failed to import class 'moves.DEMove' from module 'emcee'; the following exception was raised:
No module named 'emcee'
WARNING: autodoc: failed to import class 'moves.DESnookerMove' from module 'emcee'; the following exception was raised:
No module named 'emcee'
WARNING: autodoc: failed to import class 'moves.MHMove' from module 'emcee'; the following exception was raised:
No module named 'emcee'
WARNING: autodoc: failed to import class 'moves.GaussianMove' from module 'emcee'; the following exception was raised:
No module named 'emcee'
WARNING: autodoc: failed to import class 'EnsembleSampler' from module 'emcee'; the following exception was raised:
No module named 'emcee'
WARNING: autodoc: failed to import class 'State' from module 'emcee'; the following exception was raised:
No module named 'emcee'
looking for now-outdated files... none found
pickling environment... done
checking consistency... done
writing... python-emcee.3 { user/install user/sampler user/moves user/blobs user/backends user/autocorr user/upgrade user/faq tutorials/quickstart tutorials/line tutorials/parallel tutorials/autocorr tutorials/monitor tutorials/moves } /home/tkloczko/rpmbuild/BUILD/emcee-3.1.3/docs/user/sampler.rst:6: WARNING: py:class reference target not found: EnsembleSampler
/home/tkloczko/rpmbuild/BUILD/emcee-3.1.3/docs/user/sampler.rst:12: WARNING: py:class reference target not found: EnsembleSampler
/home/tkloczko/rpmbuild/BUILD/emcee-3.1.3/docs/user/sampler.rst:12: WARNING: py:class reference target not found: State
/home/tkloczko/rpmbuild/BUILD/emcee-3.1.3/docs/user/moves.rst:27: WARNING: py:class reference target not found: EnsembleSampler
/home/tkloczko/rpmbuild/BUILD/emcee-3.1.3/docs/user/moves.rst:33: WARNING: py:class reference target not found: moves.StretchMove
/home/tkloczko/rpmbuild/BUILD/emcee-3.1.3/docs/user/moves.rst:33: WARNING: py:class reference target not found: moves.RedBlueMove
/home/tkloczko/rpmbuild/BUILD/emcee-3.1.3/docs/user/moves.rst:33: WARNING: py:class reference target not found: moves.MHMove
/home/tkloczko/rpmbuild/BUILD/emcee-3.1.3/docs/user/moves.rst:33: WARNING: py:class reference target not found: moves.GaussianMove
/home/tkloczko/rpmbuild/BUILD/emcee-3.1.3/docs/user/blobs.rst:59: WARNING: py:class reference target not found: EnsembleSampler
/home/tkloczko/rpmbuild/BUILD/emcee-3.1.3/docs/user/backends.rst:12: WARNING: py:class reference target not found: emcee.backends.HDFBackend
/home/tkloczko/rpmbuild/BUILD/emcee-3.1.3/docs/user/backends.rst:12: WARNING: py:class reference target not found: backends.HDFBackend
/home/tkloczko/rpmbuild/BUILD/emcee-3.1.3/docs/user/upgrade.rst:19: WARNING: py:class reference target not found: EnsembleSampler
/home/tkloczko/rpmbuild/BUILD/emcee-3.1.3/docs/tutorials/quickstart.ipynb:70002: WARNING: py:class reference target not found: EnsembleSampler
/home/tkloczko/rpmbuild/BUILD/emcee-3.1.3/docs/tutorials/quickstart.ipynb:120002: WARNING: py:class reference target not found: EnsembleSampler
/home/tkloczko/rpmbuild/BUILD/emcee-3.1.3/docs/tutorials/quickstart.ipynb:180002: WARNING: py:func reference target not found: EnsembleSampler.run_mcmc
/home/tkloczko/rpmbuild/BUILD/emcee-3.1.3/docs/tutorials/quickstart.ipynb:180002: WARNING: py:func reference target not found: EnsembleSampler.reset
/home/tkloczko/rpmbuild/BUILD/emcee-3.1.3/docs/tutorials/quickstart.ipynb:200002: WARNING: py:func reference target not found: EnsembleSampler.get_chain
/home/tkloczko/rpmbuild/BUILD/emcee-3.1.3/docs/tutorials/quickstart.ipynb:220002: WARNING: py:func reference target not found: EnsembleSampler.acceptance_fraction
/home/tkloczko/rpmbuild/BUILD/emcee-3.1.3/docs/tutorials/line.ipynb:190002: WARNING: py:func reference target not found: EnsembleSampler.get_chain
/home/tkloczko/rpmbuild/BUILD/emcee-3.1.3/docs/tutorials/monitor.ipynb:10009: WARNING: py:class reference target not found: backends.HDFBackend
/home/tkloczko/rpmbuild/BUILD/emcee-3.1.3/docs/tutorials/monitor.ipynb:110002: WARNING: py:class reference target not found: backends.HDFBackend
/home/tkloczko/rpmbuild/BUILD/emcee-3.1.3/docs/tutorials/monitor.ipynb:130004: WARNING: py:func reference target not found: backends.HDFBackend.reset
/home/tkloczko/rpmbuild/BUILD/emcee-3.1.3/docs/tutorials/moves.ipynb:40002: WARNING: py:class reference target not found: moves.StretchMove
/home/tkloczko/rpmbuild/BUILD/emcee-3.1.3/docs/tutorials/moves.ipynb:80002: WARNING: py:class reference target not found: moves.DEMove
/home/tkloczko/rpmbuild/BUILD/emcee-3.1.3/docs/tutorials/moves.ipynb:80002: WARNING: py:class reference target not found: moves.DESnookerMove
/home/tkloczko/rpmbuild/BUILD/emcee-3.1.3/docs/tutorials/moves.ipynb:80002: WARNING: py:class reference target not found: moves.DESnookerMove
done
build succeeded, 40 warnings.

This can be fixed by patch like below:

--- a/docs/conf.py
+++ b/docs/conf.py
@@ -1,5 +1,9 @@
 # -*- coding: utf-8 -*-

+import sys
+import os
+sys.path.insert(0, os.path.abspath("../src"))
+
 from pkg_resources import DistributionNotFound, get_distribution

 try:

This patch fixes what is in the comment and that can of fix is suggested in sphinx example copy.py https://www.sphinx-doc.org/en/master/usage/configuration.html#example-of-configuration-file

Than … on building my packages I’m using sphinx-build command with -n switch which shows warmings about missing references. These are not critical issues.

+ /usr/bin/sphinx-build -j48 -n -T -b man docs build/sphinx/man
Running Sphinx v5.2.2
making output directory... done
myst v0.18.0: MdParserConfig(commonmark_only=False, gfm_only=False, enable_extensions=['dollarmath', 'colon_fence'], disable_syntax=[], all_links_external=False, url_schemes=('http', 'https', 'mailto', 'ftp'), ref_domains=None, highlight_code_blocks=True, number_code_blocks=[], title_to_header=False, heading_anchors=None, heading_slug_func=None, footnote_transition=True, words_per_minute=200, sub_delimiters=('{', '}'), linkify_fuzzy_links=True, dmath_allow_labels=True, dmath_allow_space=True, dmath_allow_digits=True, dmath_double_inline=False, update_mathjax=True, mathjax_classes='tex2jax_process|mathjax_process|math|output_area')
myst-nb v0.16.0: NbParserConfig(custom_formats={}, metadata_key='mystnb', cell_metadata_key='mystnb', kernel_rgx_aliases={}, execution_mode='off', execution_cache_path='', execution_excludepatterns=(), execution_timeout=-1, execution_in_temp=False, execution_allow_errors=False, execution_raise_on_error=False, execution_show_tb=False, merge_streams=False, render_plugin='default', remove_code_source=False, remove_code_outputs=False, number_source_lines=False, output_stderr='show', render_text_lexer='myst-ansi', render_error_lexer='ipythontb', render_image_options={}, render_figure_options={}, render_markdown_format='commonmark', output_folder='build', append_css=True, metadata_to_fm=False)
Using jupyter-cache at: /home/tkloczko/rpmbuild/BUILD/emcee-3.1.3/build/sphinx/.jupyter_cache
building [mo]: targets for 0 po files that are out of date
building [man]: all manpages
updating environment: [new config] 15 added, 0 changed, 0 removed
reading sources... [100%] user/upgrade
looking for now-outdated files... none found
pickling environment... done
checking consistency... done
writing... python-emcee.3 { user/install user/sampler user/moves user/blobs user/backends user/autocorr user/upgrade user/faq tutorials/quickstart tutorials/line tutorials/parallel tutorials/autocorr tutorials/monitor tutorials/moves } /home/tkloczko/rpmbuild/BUILD/emcee-3.1.3/docs/user/sampler.rst:6: WARNING: py:class reference target not found: EnsembleSampler
/home/tkloczko/rpmbuild/BUILD/emcee-3.1.3/src/emcee/ensemble.py:docstring of emcee.ensemble.EnsembleSampler:1: WARNING: py:class reference target not found: callable
/home/tkloczko/rpmbuild/BUILD/emcee-3.1.3/src/emcee/ensemble.py:docstring of emcee.ensemble.EnsembleSampler:18: WARNING: py:class reference target not found: StretchMove
/home/tkloczko/rpmbuild/BUILD/emcee-3.1.3/src/emcee/ensemble.py:docstring of emcee.ensemble.EnsembleSampler.get_autocorr_time:1: WARNING: py:class reference target not found: array
/home/tkloczko/rpmbuild/BUILD/emcee-3.1.3/src/emcee/ensemble.py:docstring of emcee.ensemble.EnsembleSampler.get_autocorr_time:1: WARNING: py:class reference target not found: ndim
/home/tkloczko/rpmbuild/BUILD/emcee-3.1.3/src/emcee/ensemble.py:docstring of emcee.ensemble.EnsembleSampler.get_blobs:1: WARNING: py:class reference target not found: array
/home/tkloczko/rpmbuild/BUILD/emcee-3.1.3/src/emcee/ensemble.py:docstring of emcee.ensemble.EnsembleSampler.get_blobs:1: WARNING: py:class reference target not found: nwalkers
/home/tkloczko/rpmbuild/BUILD/emcee-3.1.3/src/emcee/ensemble.py:docstring of emcee.ensemble.EnsembleSampler.get_chain:1: WARNING: py:class reference target not found: array
/home/tkloczko/rpmbuild/BUILD/emcee-3.1.3/src/emcee/ensemble.py:docstring of emcee.ensemble.EnsembleSampler.get_chain:1: WARNING: py:class reference target not found: nwalkers
/home/tkloczko/rpmbuild/BUILD/emcee-3.1.3/src/emcee/ensemble.py:docstring of emcee.ensemble.EnsembleSampler.get_chain:1: WARNING: py:class reference target not found: ndim
/home/tkloczko/rpmbuild/BUILD/emcee-3.1.3/src/emcee/ensemble.py:docstring of emcee.ensemble.EnsembleSampler.get_log_prob:1: WARNING: py:class reference target not found: array
/home/tkloczko/rpmbuild/BUILD/emcee-3.1.3/src/emcee/ensemble.py:docstring of emcee.ensemble.EnsembleSampler.get_log_prob:1: WARNING: py:class reference target not found: nwalkers
/home/tkloczko/rpmbuild/BUILD/emcee-3.1.3/src/emcee/ensemble.py:docstring of emcee.ensemble.EnsembleSampler.sample:: WARNING: py:class reference target not found: ndarray
/home/tkloczko/rpmbuild/BUILD/emcee-3.1.3/src/emcee/ensemble.py:docstring of emcee.ensemble.EnsembleSampler.sample:: WARNING: py:class reference target not found: nwalkers
/home/tkloczko/rpmbuild/BUILD/emcee-3.1.3/src/emcee/ensemble.py:docstring of emcee.ensemble.EnsembleSampler.sample:: WARNING: py:class reference target not found: ndim
/home/tkloczko/rpmbuild/BUILD/emcee-3.1.3/src/emcee/ensemble.py:docstring of emcee.ensemble.EnsembleSampler.sample:: WARNING: py:class reference target not found: NoneType
/home/tkloczko/rpmbuild/BUILD/emcee-3.1.3/docs/user/sampler.rst:12: WARNING: py:class reference target not found: EnsembleSampler
/home/tkloczko/rpmbuild/BUILD/emcee-3.1.3/docs/user/sampler.rst:12: WARNING: py:class reference target not found: State
/home/tkloczko/rpmbuild/BUILD/emcee-3.1.3/src/emcee/state.py:docstring of emcee.state.State:1: WARNING: py:class reference target not found: ndarray
/home/tkloczko/rpmbuild/BUILD/emcee-3.1.3/src/emcee/state.py:docstring of emcee.state.State:1: WARNING: py:class reference target not found: nwalkers
/home/tkloczko/rpmbuild/BUILD/emcee-3.1.3/src/emcee/state.py:docstring of emcee.state.State:1: WARNING: py:class reference target not found: ndim
/home/tkloczko/rpmbuild/BUILD/emcee-3.1.3/src/emcee/state.py:docstring of emcee.state.State:1: WARNING: py:class reference target not found: ndarray
/home/tkloczko/rpmbuild/BUILD/emcee-3.1.3/src/emcee/state.py:docstring of emcee.state.State:1: WARNING: py:class reference target not found: nwalkers
/home/tkloczko/rpmbuild/BUILD/emcee-3.1.3/src/emcee/state.py:docstring of emcee.state.State:1: WARNING: py:class reference target not found: ndim
/home/tkloczko/rpmbuild/BUILD/emcee-3.1.3/docs/user/moves.rst:27: WARNING: py:class reference target not found: EnsembleSampler
/home/tkloczko/rpmbuild/BUILD/emcee-3.1.3/docs/user/moves.rst:33: WARNING: py:class reference target not found: moves.StretchMove
/home/tkloczko/rpmbuild/BUILD/emcee-3.1.3/docs/user/moves.rst:33: WARNING: py:class reference target not found: moves.RedBlueMove
/home/tkloczko/rpmbuild/BUILD/emcee-3.1.3/docs/user/moves.rst:33: WARNING: py:class reference target not found: moves.MHMove
/home/tkloczko/rpmbuild/BUILD/emcee-3.1.3/docs/user/moves.rst:33: WARNING: py:class reference target not found: moves.GaussianMove
/home/tkloczko/rpmbuild/BUILD/emcee-3.1.3/src/emcee/moves/mh.py:docstring of emcee.moves.mh.MHMove:3: WARNING: py:class reference target not found: moves.GaussianMove
/home/tkloczko/rpmbuild/BUILD/emcee-3.1.3/docs/user/blobs.rst:59: WARNING: py:class reference target not found: EnsembleSampler
/home/tkloczko/rpmbuild/BUILD/emcee-3.1.3/docs/user/backends.rst:12: WARNING: py:class reference target not found: backends.HDFBackend
/home/tkloczko/rpmbuild/BUILD/emcee-3.1.3/src/emcee/backends/backend.py:docstring of emcee.backends.backend.Backend.get_autocorr_time:1: WARNING: py:class reference target not found: array
/home/tkloczko/rpmbuild/BUILD/emcee-3.1.3/src/emcee/backends/backend.py:docstring of emcee.backends.backend.Backend.get_autocorr_time:1: WARNING: py:class reference target not found: ndim
/home/tkloczko/rpmbuild/BUILD/emcee-3.1.3/src/emcee/backends/backend.py:docstring of emcee.backends.backend.Backend.get_blobs:1: WARNING: py:class reference target not found: array
/home/tkloczko/rpmbuild/BUILD/emcee-3.1.3/src/emcee/backends/backend.py:docstring of emcee.backends.backend.Backend.get_blobs:1: WARNING: py:class reference target not found: nwalkers
/home/tkloczko/rpmbuild/BUILD/emcee-3.1.3/src/emcee/backends/backend.py:docstring of emcee.backends.backend.Backend.get_chain:1: WARNING: py:class reference target not found: array
/home/tkloczko/rpmbuild/BUILD/emcee-3.1.3/src/emcee/backends/backend.py:docstring of emcee.backends.backend.Backend.get_chain:1: WARNING: py:class reference target not found: nwalkers
/home/tkloczko/rpmbuild/BUILD/emcee-3.1.3/src/emcee/backends/backend.py:docstring of emcee.backends.backend.Backend.get_chain:1: WARNING: py:class reference target not found: ndim
/home/tkloczko/rpmbuild/BUILD/emcee-3.1.3/src/emcee/backends/backend.py:docstring of emcee.backends.backend.Backend.get_log_prob:1: WARNING: py:class reference target not found: array
/home/tkloczko/rpmbuild/BUILD/emcee-3.1.3/src/emcee/backends/backend.py:docstring of emcee.backends.backend.Backend.get_log_prob:1: WARNING: py:class reference target not found: nwalkers
/home/tkloczko/rpmbuild/BUILD/emcee-3.1.3/src/emcee/backends/backend.py:docstring of emcee.backends.backend.Backend.save_step:3: WARNING: py:class reference target not found: State
/home/tkloczko/rpmbuild/BUILD/emcee-3.1.3/src/emcee/backends/backend.py:docstring of emcee.backends.backend.Backend.save_step:1: WARNING: py:class reference target not found: ndarray
/home/tkloczko/rpmbuild/BUILD/emcee-3.1.3/src/emcee/backends/hdf.py:docstring of emcee.backends.hdf.HDFBackend:1: WARNING: py:class reference target not found: str; optional
/home/tkloczko/rpmbuild/BUILD/emcee-3.1.3/src/emcee/backends/hdf.py:docstring of emcee.backends.hdf.HDFBackend:1: WARNING: py:class reference target not found: bool; optional
/home/tkloczko/rpmbuild/BUILD/emcee-3.1.3/src/emcee/backends/hdf.py:docstring of emcee.backends.backend.Backend.get_autocorr_time:1: WARNING: py:class reference target not found: array
/home/tkloczko/rpmbuild/BUILD/emcee-3.1.3/src/emcee/backends/hdf.py:docstring of emcee.backends.backend.Backend.get_autocorr_time:1: WARNING: py:class reference target not found: ndim
/home/tkloczko/rpmbuild/BUILD/emcee-3.1.3/src/emcee/backends/hdf.py:docstring of emcee.backends.backend.Backend.get_blobs:1: WARNING: py:class reference target not found: array
/home/tkloczko/rpmbuild/BUILD/emcee-3.1.3/src/emcee/backends/hdf.py:docstring of emcee.backends.backend.Backend.get_blobs:1: WARNING: py:class reference target not found: nwalkers
/home/tkloczko/rpmbuild/BUILD/emcee-3.1.3/src/emcee/backends/hdf.py:docstring of emcee.backends.backend.Backend.get_chain:1: WARNING: py:class reference target not found: array
/home/tkloczko/rpmbuild/BUILD/emcee-3.1.3/src/emcee/backends/hdf.py:docstring of emcee.backends.backend.Backend.get_chain:1: WARNING: py:class reference target not found: nwalkers
/home/tkloczko/rpmbuild/BUILD/emcee-3.1.3/src/emcee/backends/hdf.py:docstring of emcee.backends.backend.Backend.get_chain:1: WARNING: py:class reference target not found: ndim
/home/tkloczko/rpmbuild/BUILD/emcee-3.1.3/src/emcee/backends/hdf.py:docstring of emcee.backends.backend.Backend.get_log_prob:1: WARNING: py:class reference target not found: array
/home/tkloczko/rpmbuild/BUILD/emcee-3.1.3/src/emcee/backends/hdf.py:docstring of emcee.backends.backend.Backend.get_log_prob:1: WARNING: py:class reference target not found: nwalkers
/home/tkloczko/rpmbuild/BUILD/emcee-3.1.3/src/emcee/backends/hdf.py:docstring of emcee.backends.hdf.HDFBackend.save_step:3: WARNING: py:class reference target not found: State
/home/tkloczko/rpmbuild/BUILD/emcee-3.1.3/src/emcee/backends/hdf.py:docstring of emcee.backends.hdf.HDFBackend.save_step:1: WARNING: py:class reference target not found: ndarray
/home/tkloczko/rpmbuild/BUILD/emcee-3.1.3/src/emcee/autocorr.py:docstring of emcee.autocorr.integrated_time:16: WARNING: py:class reference target not found: AutocorrError
/home/tkloczko/rpmbuild/BUILD/emcee-3.1.3/src/emcee/autocorr.py:docstring of emcee.autocorr.integrated_time:1: WARNING: py:class reference target not found: array
/home/tkloczko/rpmbuild/BUILD/emcee-3.1.3/src/emcee/autocorr.py:docstring of emcee.autocorr.function_1d:1: WARNING: py:class reference target not found: array
/home/tkloczko/rpmbuild/BUILD/emcee-3.1.3/docs/user/upgrade.rst:19: WARNING: py:class reference target not found: EnsembleSampler
/home/tkloczko/rpmbuild/BUILD/emcee-3.1.3/docs/tutorials/quickstart.ipynb:70002: WARNING: py:class reference target not found: EnsembleSampler
/home/tkloczko/rpmbuild/BUILD/emcee-3.1.3/docs/tutorials/quickstart.ipynb:120002: WARNING: py:class reference target not found: EnsembleSampler
/home/tkloczko/rpmbuild/BUILD/emcee-3.1.3/docs/tutorials/quickstart.ipynb:180002: WARNING: py:func reference target not found: EnsembleSampler.run_mcmc
/home/tkloczko/rpmbuild/BUILD/emcee-3.1.3/docs/tutorials/quickstart.ipynb:180002: WARNING: py:func reference target not found: EnsembleSampler.reset
/home/tkloczko/rpmbuild/BUILD/emcee-3.1.3/docs/tutorials/quickstart.ipynb:200002: WARNING: py:func reference target not found: EnsembleSampler.get_chain
/home/tkloczko/rpmbuild/BUILD/emcee-3.1.3/docs/tutorials/quickstart.ipynb:220002: WARNING: py:func reference target not found: EnsembleSampler.acceptance_fraction
/home/tkloczko/rpmbuild/BUILD/emcee-3.1.3/docs/tutorials/line.ipynb:190002: WARNING: py:func reference target not found: EnsembleSampler.get_chain
/home/tkloczko/rpmbuild/BUILD/emcee-3.1.3/docs/tutorials/monitor.ipynb:10009: WARNING: py:class reference target not found: backends.HDFBackend
/home/tkloczko/rpmbuild/BUILD/emcee-3.1.3/docs/tutorials/monitor.ipynb:110002: WARNING: py:class reference target not found: backends.HDFBackend
/home/tkloczko/rpmbuild/BUILD/emcee-3.1.3/docs/tutorials/monitor.ipynb:130004: WARNING: py:func reference target not found: backends.HDFBackend.reset
/home/tkloczko/rpmbuild/BUILD/emcee-3.1.3/docs/tutorials/moves.ipynb:40002: WARNING: py:class reference target not found: moves.StretchMove
/home/tkloczko/rpmbuild/BUILD/emcee-3.1.3/docs/tutorials/moves.ipynb:80002: WARNING: py:class reference target not found: moves.DEMove
/home/tkloczko/rpmbuild/BUILD/emcee-3.1.3/docs/tutorials/moves.ipynb:80002: WARNING: py:class reference target not found: moves.DESnookerMove
/home/tkloczko/rpmbuild/BUILD/emcee-3.1.3/docs/tutorials/moves.ipynb:80002: WARNING: py:class reference target not found: moves.DESnookerMove
done
build succeeded, 74 warnings.

You can peak on fixes that kind of issues in other projects https://github.com/latchset/jwcrypto/pull/289 https://github.com/click-contrib/sphinx-click/commit/abc31069 https://github.com/latchset/jwcrypto/pull/289 https://github.com/RDFLib/rdflib-sqlalchemy/issues/95 https://github.com/sissaschool/elementpath/commit/bf869d9e https://github.com/jaraco/cssutils/issues/21 https://github.com/pywbem/pywbem/pull/2895 https://github.com/sissaschool/xmlschema/commit/42ea98f2 https://github.com/RDFLib/rdflib/pull/2036 https://github.com/frostming/unearth/issues/14 https://github.com/pypa/distlib/commit/98b9b89f

Issue Analytics

  • State:open
  • Created a year ago
  • Comments:12 (5 by maintainers)

github_iconTop GitHub Comments

1reaction
dfmcommented, Sep 28, 2022

Right, you’re running build first, not install, my bad!

0reactions
kloczekcommented, Sep 28, 2022

Apologies accepted. Don’t worry 😄

Read more comments on GitHub >

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