Add plot directives

Checklist to go through for (potentially) replacing python code + png import with the plot directive. This is just a project management issue to give contributors some direction.

Quickstart

http://www.scikit-yb.org/en/latest/quickstart.html quickstart.rst

• bikeshare_rank2d.png
• temp_feelslike_jointplot.png
• bikeshare_ols_residuals.png
• bikeshare_ridge_alphas.png
• bikeshare_ridge_prediction_error.png

Gallery

… lots to do and figure out here …

update: we’ve made the gallery independent and created a script to generate the gallery docs (the plot directive didn’t work well in the gallery). See #732

Tutorial

update: this has been updated to use the new datasets module (see #818) but we’ve opted not to do the plot directive because it disrupts the flow of the tutorial and makes the docs take a long time to build

~Lot’s of split code here, so I’ll need to know how the team wants it formatted~

~http://www.scikit-yb.org/en/latest/tutorial.html# tutorial.rst~

~- [ ] modelselect_linear_svc.png~ ~- [ ] modelselect_nu_svc.png~ ~- [ ] modelselect_svc.png~ ~- [ ] modelselect_sgd_classifier.png~ ~- [ ] modelselect_kneighbors_classifier.png~ ~- [ ] modelselect_logistic_regression_cv.png~ ~- [ ] modelselect_logistic_regression.png~ ~- [ ] modelselect_bagging_classifier.png~ ~- [ ] modelselect_extra_trees_classifier.png~ ~- [ ] modelselect_random_forest_classifier.png~

API

• Anscombe’s quartet: anscomb.png

Radviz

• Features\radviz radviz.png

Rankd

• Features\rankd rank1d_shapiro.png
• Features\rankd rank2d_pearson.png
• Features\rankd rank2d_covariance.png

Pcoords

• Features\pcoords parallel_coordinates.png
• Features\pcoords normalized_sampled_parallel_coordinates.png
• Features\pcoords fast_vs_slow_parallel_coordinates.png
• Features\pcoords fast_parallel_coordinates_speedup.png

PCA

• Features\pca pca_projection_2d.png
• Features\pca pca_projection_3d.png
• Features\pca pca_biplot_2d.png
• Features\pca pca_biplot_3d.png

Manifold

*update: we have opted not to use the plot directive for manifold because it makes the docs take a long time to build

~- [ ] Features\manifold concrete_tsne_manifold.png (this one has no accompanying code in rst)~ ~- [ ] Features\manifold occupancy_select_k_best_isomap_manifold.png~ ~- [ ] Features\manifold concrete_isomap_manifold.png~

Importances

• Features\importances feature_importances.png
• Features\importances feature_importances_coef.png
• Features\importances feature_importances_stacked.png

RFECV

*update: we have opted not to use the plot directive for RFEVC because it makes the docs take a long time to build

~- [ ] Features\rfecv rfecv_sklearn_example.png~ ~- [ ] Features\rfecv rfecv_credit.png~

Joint plot

Note: Joint Plot documentation is updated in #728

Text Visualizers

DispersionPlot

• Text\dispersionplot dispersion_docs.png

Note that the docs/api/text/images/dispersion_docs.png image was not removed because it is being used in the gallery.

[rebeccabilbro]

Going to go ahead and mark this one complete! 🎉 Thanks for all the hard work to everyone who contributed to this massive but very worthwhile effort, with special thanks to @Kautumn06 @lwgray @pdamodaran for reviewing the large majority of the resulting PRs!

[lwgray]

no other suggestions from me.