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Galaxy workflow path regex and workflow path length

See original GitHub issue

If you try and edit a galaxy workflow version, the save/update button is disabled. This is because it thinks the workflow path is invalid. I think this is likely due to the regex not testing for files ending in .ga

Also related somewhat, but I cannot set the workflow path when registering the workflow to be /topics/genome-annotation/tutorials/annotation-with-prokka/workflows/Galaxy-Workflow-Workflow_constructed_from_history__prokka-workflow_.ga because it is too long. Not sure if this is UI only or also in webservice.

https://github.com/dockstore/dockstore/issues/3186

┆Issue is synchronized with this Jira Story ┆Fix Versions: Dockstore 1.9 ┆Issue Number: DOCK-1243 ┆Sprint: Sprint 30 Eel ┆Issue Type: Story

Issue Analytics

  • State:closed
  • Created 4 years ago
  • Comments:9 (8 by maintainers)

github_iconTop GitHub Comments

1reaction
garyluucommented, Mar 5, 2020

Clarification. The regex thing was done and merged before this issue was even created (should still be tested though). The only thing changed after this issue was created is the workflow path length.

0reactions
coverbeckcommented, Apr 2, 2020

Verified that I was able to edit Galaxy workflow version in dev.dockstore.net environment, and that I was able to set the workflow path to that long value.

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