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Nextflow DSL2 DAG support
See original GitHub issueBuilding off #3674
Is your feature request related to a problem? Please describe. Nextflow DSL2 workflows have broken DAG visualizations.
Describe the solution you’d like Add DAG visualization support for DSL2 Nextflow workflows.
Upgrading the webservice executable from 19.01.0 to 20.07.1 doesn’t seem to resolve this issue. Would need to look deeper into what’s needed for this to work.
Describe alternatives you’ve considered Unsure whether this will be dependent on indexing modules (#3761), depends on whether we generate the DAG visualization ourselves or if we use the nextflow executable.
Additional context
Example:
Workflow rnaseq-nf tag v1.2 is DSL1 and dag works:
However tag v2.0 is DSL2 and dag does not work:
┆Issue is synchronized with this Jira Story ┆fixVersions: Dockstore 1.13 ┆friendlyId: DOCK-1553 ┆sprint: Backlog ┆taskType: Story
Issue Analytics
- State:
- Created 3 years ago
- Comments:6 (2 by maintainers)
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Didn’t know, registered https://dev.dockstore.net/workflows/github.com/nextflow-io/rnaseq-nf/asdf:v2.0?tab=dag and it seems to be ok
➤ Denis Yuen commented:
Gary Luu in 1:1, think we tagged the wrong person, do you happen to know if this is in 1.12 already