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Verifiedsource null for some verified workflow version

See original GitHub issue

Bug Report

Expected behaviour

Verifying a sourcefile with /api/ga4gh/v2/extended/{id}/versions/{version_id}/{type}/tests/{relative_path} Annotate test JSON with information on whether it ran successfully on particular platforms plus metadata should result in a workflow version or tag to be verified with a non-null verifiedsource

Actual behaviour

Verifiedsource is null, 1.5.1 /tools endpoint runs into error

Steps to reproduce the behaviour

Verify the tool or version using:

response = client.extendedGA4GH.toolsIdVersionsVersionIdTypeTestsPost(type="WDL",
                                                                      id="#workflow/github.com/DataBiosphere/topmed-workflows/u_of_Michigan_alignment_pipeline",
                                                                      version_id="1.29.0",
                                                                      relative_path="u_of_michigan_aligner.json",
                                                                      platform="Cromwell",
                                                                      metadata="TOPMed, HCA via Broad", verified=False).response().result

Try to hit the /tools endpoint

┆Issue is synchronized with this Jira Bug ┆Fix Versions: Dockstore 1.8 ┆Issue Number: DOCK-291 ┆Sprint: Seabright Sprint 18 Skipjack ┆Issue Type: Bug

Issue Analytics

  • State:closed
  • Created 5 years ago
  • Comments:6 (5 by maintainers)

github_iconTop GitHub Comments

1reaction
garyluucommented, Sep 10, 2019

The endpoint was somewhat recently modified with my PR. It’s better to wait and avoid more potential sync issues with the current endpoint

0reactions
Ldcabansaycommented, Jan 10, 2020

Outdated issue, see #2376, more relevant and updated fixes.

Read more comments on GitHub >

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