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WARNING: could not find bibtex key

See original GitHub issue

Describe the bug

I need to include references in my book. I get the error WARNING: could not find bibtex key "MYKEY" In the output html I get only square brackets []. The keys are present in my references.bib file.

Reproduce the bug

To reproduce the problem just build the notebooks.

jupyter-book build --all .

Citations should be present in the content of notebooks according to instructions: https://jupyterbook.org/content/citations.html

List your environment

My enviroment is:

Debian GNU/Linux 11 (bullseye) (5.8.0-0.bpo.2-amd64 kernel)

Python 3.10.2

Jupyter Book : 0.12.2 External ToC : 0.2.3 MyST-Parser : 0.15.2 MyST-NB : 0.13.1 Sphinx Book Theme : 0.1.10 Jupyter-Cache : 0.4.3 NbClient : 0.5.12

Packages in conda environment:

_libgcc_mutex=0.1=conda_forge _openmp_mutex=4.5=1_gnu _r-mutex=1.0.1=anacondar_1 alabaster=0.7.12=py_0 alsa-lib=1.2.3=h516909a_0 anyio=3.5.0=py310hff52083_0 argon2-cffi=21.3.0=pyhd8ed1ab_0 argon2-cffi-bindings=21.2.0=py310h6acc77f_1 asttokens=2.0.5=pyhd8ed1ab_0 attrs=21.4.0=pyhd8ed1ab_0 babel=2.9.1=pyh44b312d_0 backcall=0.2.0=pyh9f0ad1d_0 backports=1.1=pyhd3eb1b0_0 backports.functools_lru_cache=1.6.4=pyhd8ed1ab_0 beautifulsoup4=4.10.0=pyha770c72_0 binutils_impl_linux-64=2.36.1=h193b22a_2 binutils_linux-64=2.36=hf3e587d_6 bleach=4.1.0=pyhd8ed1ab_0 blosc=1.21.0=h9c3ff4c_0 boost-cpp=1.74.0=h6cacc03_7 brotli=1.0.9=h7f98852_6 brotli-bin=1.0.9=h7f98852_6 brotlipy=0.7.0=py310h6acc77f_1003 bwidget=1.9.14=ha770c72_1 bzip2=1.0.8=h7f98852_4 c-ares=1.18.1=h7f98852_0 ca-certificates=2022.2.1=h06a4308_0 cairo=1.16.0=ha00ac49_1009 certifi=2021.10.8=py310hff52083_1 cffi=1.15.0=py310h0fdd8cc_0 cfitsio=4.0.0=h9a35b8e_0 charset-normalizer=2.0.12=pyhd8ed1ab_0 click=7.1.2=pyh9f0ad1d_0 click-completion=0.5.2=py310hff52083_3 click-log=0.3.2=pyh9f0ad1d_0 colorama=0.4.4=pyh9f0ad1d_0 cryptography=36.0.1=py310h685ca39_0 curl=7.82.0=h7bff187_0 cycler=0.11.0=pyhd8ed1ab_0 dataclasses=0.8=pyhc8e2a94_3 dbus=1.13.18=hb2f20db_0 debugpy=1.5.1=py310h122e73d_0 decorator=5.1.1=pyhd8ed1ab_0 defusedxml=0.7.1=pyhd8ed1ab_0 docutils=0.15.2=py310hff52083_3 entrypoints=0.4=pyhd8ed1ab_0 executing=0.8.3=pyhd8ed1ab_0 expat=2.4.7=h27087fc_0 flit-core=3.7.1=pyhd8ed1ab_0 font-ttf-dejavu-sans-mono=2.37=hab24e00_0 font-ttf-inconsolata=3.000=h77eed37_0 font-ttf-source-code-pro=2.038=h77eed37_0 font-ttf-ubuntu=0.83=hab24e00_0 fontconfig=2.13.96=h8e229c2_1 fonts-conda-ecosystem=1=0 fonts-conda-forge=1=0 fonttools=4.29.1=py310h6acc77f_0 freetype=2.11.0=h70c0345_0 freexl=1.0.6=h7f98852_0 fribidi=1.0.10=h36c2ea0_0 gcc_impl_linux-64=9.4.0=h03d3576_13 gcc_linux-64=9.4.0=h391b98a_6 geos=3.10.2=h9c3ff4c_0 geotiff=1.7.0=h6593c0a_6 gettext=0.21.0=hf68c758_0 gfortran_impl_linux-64=9.4.0=h0003116_13 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Issue Analytics

  • State:closed
  • Created 2 years ago
  • Reactions:2
  • Comments:5

github_iconTop GitHub Comments

5reactions
juhuebnercommented, Mar 17, 2022

You have to have this or similar somewhere (worked for me also with v0.12.2 and its actual dependencies)

```{bibliography}
```

That’s kind-of not clear in the docs, or possibly there is a default way missing (?)

0reactions
kokkytoscommented, Mar 20, 2022

You have to have this or similar somewhere (worked for me also with v0.12.2 and its actual dependencies)

```{bibliography}

That's kind-of not clear in the docs, or possibly there is a default way missing (?)

This solved the issue

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