Building on Linux

When building on linux following the README.md I get the following issue, I think its related to the node/nodejs package name issues…

user@computer oncoscape/server/ # npm install

> rstats@0.3.1 install /home/user/Development/Oncoscape/server/node_modules/rstats
> node-gyp rebuild

gyp WARN EACCES user "root" does not have permission to access the dev dir "/root/.node-gyp/5.10.0"
gyp WARN EACCES attempting to reinstall using temporary dev dir "/home/user/Development/Oncoscape/server/node_modules/rstats/.node-gyp"
make: Entering directory `/home/user/Development/Oncoscape/server/node_modules/rstats/build'
  CXX(target) Release/obj.target/R/src/rl.o
  CXX(target) Release/obj.target/R/src/rlink.o
  SOLINK_MODULE(target) Release/obj.target/R.node
/usr/bin/ld: cannot find -llzma
/usr/bin/ld: cannot find -lbz2
collect2: error: ld returned 1 exit status
make: *** [Release/obj.target/R.node] Error 1
make: Leaving directory `/home/user/Development/Oncoscape/server/node_modules/rstats/build'
gyp ERR! build error 
gyp ERR! stack Error: `make` failed with exit code: 2
gyp ERR! stack     at ChildProcess.onExit (/usr/lib/node_modules/npm/node_modules/node-gyp/lib/build.js:276:23)
gyp ERR! stack     at emitTwo (events.js:100:13)
gyp ERR! stack     at ChildProcess.emit (events.js:185:7)
gyp ERR! stack     at Process.ChildProcess._handle.onexit (internal/child_process.js:204:12)
gyp ERR! System Linux 4.2.0-25-generic
gyp ERR! command "/usr/bin/nodejs" "/usr/lib/node_modules/npm/node_modules/node-gyp/bin/node-gyp.js" "rebuild"
gyp ERR! cwd /home/user/Development/Oncoscape/server/node_modules/rstats
gyp ERR! node -v v5.10.0
gyp ERR! node-gyp -v v3.3.1
gyp ERR! not ok 
npm WARN oncoscape@15.0.0 No repository field.
npm ERR! Linux 4.2.0-25-generic
npm ERR! argv "/usr/bin/nodejs" "/usr/bin/npm" "install"
npm ERR! node v5.10.0
npm ERR! npm  v3.8.3
npm ERR! code ELIFECYCLE

npm ERR! rstats@0.3.1 install: `node-gyp rebuild`
npm ERR! Exit status 1
npm ERR! 
npm ERR! Failed at the rstats@0.3.1 install script 'node-gyp rebuild'.
npm ERR! Make sure you have the latest version of node.js and npm installed.
npm ERR! If you do, this is most likely a problem with the rstats package,
npm ERR! not with npm itself.
npm ERR! Tell the author that this fails on your system:
npm ERR!     node-gyp rebuild
npm ERR! You can get information on how to open an issue for this project with:
npm ERR!     npm bugs rstats
npm ERR! Or if that isn't available, you can get their info via:
npm ERR!     npm owner ls rstats
npm ERR! There is likely additional logging output above.

[mzager]

Just wanted to check in and see how things are going. Let us know if there is anything we can do to help.

[d4rkd0s]

I am doing fine, tied up in other dev projects. I will attempt to join back in development on Oncoscape this summer sometime! Thanks for all the help @mzager