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Segmentation Fault on Test File
See original GitHub issueHi Fritz, I am getting a segmentation fault when running the test case on my cluster.
I compiled with gcc/g++ version 4.8.5.
When running the test case sniffles -m reads_region.bam -v test., I get the following
Estimating parameter...
Max dist between aln events: 4
Max diff in window: 50
Min score ratio: 2
Avg DEL ratio: 0.0432235
Avg INS ratio: 0.0740733`
Start parsing... 21
Switch Chr 21
Finalizing ..
Segmentation fault
I’ve tried recompiling with newer versions of GNU compilers (v5 and 6), but haven’t been successful.
Any help would be much appreciated.
Kevin McFarland Johns Hopkins University Chemical & Biomolecular Engineering
Issue Analytics
- State:
- Created 4 years ago
- Comments:18 (9 by maintainers)
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You can email me at malonge11@gmail.com
Perhaps I can test things out on MARCC
Thanks again for your help Fritz!
Kevin