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paket install adds src files to the wrong item group

See original GitHub issue

add github refs to paket.dependencies

github Ionide/ionide-vscode-helpers Fable.Import.VSCode.fs
github Ionide/ionide-vscode-helpers Helpers.fs
github Ionide/ionide-vscode-helpers Fable.Import.Axios.fs

add file listings to paket.references for the fsproj

File: Fable.Import.Axios.fs
File: Fable.Import.VSCode.fs
File: Helpers.fs

run paket install and get

  <ItemGroup>
    <Compile Include="..\paket-files\Ionide\ionide-vscode-helpers\Fable.Import.Axios.fs">
      <Paket>True</Paket>
      <Link>paket-files/Fable.Import.Axios.fs</Link>
    </Compile>
    <Compile Include="..\paket-files\Ionide\ionide-vscode-helpers\Fable.Import.VSCode.fs">
      <Paket>True</Paket>
      <Link>paket-files/Fable.Import.VSCode.fs</Link>
    </Compile>
    <Compile Include="..\paket-files\Ionide\ionide-vscode-helpers\Helpers.fs">
      <Paket>True</Paket>
      <Link>paket-files/Helpers.fs</Link>
    </Compile>
    <Reference Include="mscorlib" />
    <Reference Include="System" />
    <Reference Include="System.Core" />
    <Reference Include="System.Numerics" />
  </ItemGroup>
  <ItemGroup>
    <Compile Include="FSharp.SyntaxTest.fs" />
    <None Include="Script.fsx" />
  </ItemGroup>

The project file was freshly created from the classlib template in vscode.