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"too few arguments to function" trying to install h5py from source

See original GitHub issue
  • OS: SuSE Linux Enterprise 12
  • Python version: 2.7.17
  • Where Python was acquired: Compiled from source
  • h5py version: 2.10.0
  • HDF5 version: 1.12.0

I am trying to install h5py from source on a SuSE server where pretty much everything has to be compiled from source. All went well, until I tried installing h5py. python setup.py build barfed with several errors of the form error: too few arguments to function. Full build log below.

running build
running build_py
warning: build_py: byte-compiling is disabled, skipping.

running build_ext
********************************************************************************
                       Summary of the h5py configuration

    Path to HDF5: '/discover/nobackup/projects/tm5var4d/packages/hdf5/1.12.0'
    HDF5 Version: '1.12.0'
     MPI Enabled: False
Rebuild Required: True

********************************************************************************
Executing cythonize()
[ 1/23] Cythonizing /gpfsm/dnb32/sbasu1/build/h5py-2.10.0/h5py/_conv.pyx
warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared
warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared
warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared
warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared
warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared
warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared
warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared
warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared
warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared
warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared
warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared
warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared
warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared
warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared
warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared
warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared
warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared
warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared
warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared
warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared
warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared
warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared
warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared
warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared
warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared
warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared
warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared
warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared
warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared
warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared
warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared
warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared
warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared
warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared
warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared
warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared
warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared
warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared
warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared
warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared
warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared
warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared
warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared
warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared
warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared
[ 2/23] Cythonizing /gpfsm/dnb32/sbasu1/build/h5py-2.10.0/h5py/_errors.pyx
warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared
warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared
warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared
warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared
warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared
warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared
warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared
warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared
warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared
warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared
warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared
warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared
warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared
warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared
warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared
warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared
warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared
warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared
warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared
warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared
warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared
warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared
warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared
warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared
warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared
warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared
warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared
warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared
warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared
warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared
warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared
warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared
warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared
warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared
warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared
warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared
warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared
warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared
warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared
warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared
warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared
warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared
warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared
warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared
warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared
[ 3/23] Cythonizing /gpfsm/dnb32/sbasu1/build/h5py-2.10.0/h5py/_objects.pyx
warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared
warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared
warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared
warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared
warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared
warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared
warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared
warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared
warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared
warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared
warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared
warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared
warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared
warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared
warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared
warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared
warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared
warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared
warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared
warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared
warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared
warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared
warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared
warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared
warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared
warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared
warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared
warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared
warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared
warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared
warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared
warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared
warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared
warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared
warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared
warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared
warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared
warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared
warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared
warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared
warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared
warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared
warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared
warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared
warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared
[ 4/23] Cythonizing /gpfsm/dnb32/sbasu1/build/h5py-2.10.0/h5py/_proxy.pyx
warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared
warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared
warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared
warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared
warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared
warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared
warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared
warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared
warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared
warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared
warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared
warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared
warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared
warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared
warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared
warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared
warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared
warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared
warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared
warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared
warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared
warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared
warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared
warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared
warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared
warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared
warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared
warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared
warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared
warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared
warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared
warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared
warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared
warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared
warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared
warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared
warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared
warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared
warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared
warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared
warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared
warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared
warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared
warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared
warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared
[ 5/23] Cythonizing /gpfsm/dnb32/sbasu1/build/h5py-2.10.0/h5py/defs.pyx
warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared
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warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared
warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared
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warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared
warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared
warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared
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warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared
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warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared
warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared
warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared
warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared
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warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared
warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared
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[ 6/23] Cythonizing /gpfsm/dnb32/sbasu1/build/h5py-2.10.0/h5py/h5.pyx
warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared
warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared
warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared
warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared
warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared
warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared
warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared
warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared
warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared
warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared
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warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared
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warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared
warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared
warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared
warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared
warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared
warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared
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warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared
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warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared
warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared
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warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared
warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared
warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared
warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared
warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared
warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared
warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared
warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared
warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared
warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared
warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared
warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared
warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared
warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared
warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared
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[ 7/23] Cythonizing /gpfsm/dnb32/sbasu1/build/h5py-2.10.0/h5py/h5a.pyx
warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared
warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared
warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared
warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared
warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared
warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared
warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared
warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared
warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared
warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared
warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared
warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared
warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared
warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared
warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared
warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared
warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared
warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared
warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared
warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared
warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared
warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared
warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared
warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared
warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared
warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared
warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared
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warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared
warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared
warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared
warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared
warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared
warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared
warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared
warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared
warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared
warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared
warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared
warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared
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[ 8/23] Cythonizing /gpfsm/dnb32/sbasu1/build/h5py-2.10.0/h5py/h5ac.pyx
warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared
warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared
warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared
warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared
warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared
warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared
warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared
warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared
warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared
warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared
warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared
warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared
warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared
warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared
warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared
warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared
warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared
warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared
warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared
warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared
warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared
warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared
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warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared
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warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared
warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared
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warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared
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warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared
warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared
warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared
warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared
warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared
warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared
warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared
warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared
warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared
warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared
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[ 9/23] Cythonizing /gpfsm/dnb32/sbasu1/build/h5py-2.10.0/h5py/h5d.pyx
warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared
warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared
warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared
warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared
warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared
warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared
warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared
warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared
warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared
warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared
warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared
warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared
warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared
warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared
warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared
warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared
warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared
warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared
warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared
warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared
warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared
warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared
warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared
warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared
warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared
warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared
warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared
warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared
warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared
warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared
warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared
warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared
warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared
warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared
warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared
warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared
warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared
warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared
warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared
warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared
warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared
warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared
warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared
warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared
warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared
[10/23] Cythonizing /gpfsm/dnb32/sbasu1/build/h5py-2.10.0/h5py/h5ds.pyx
warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared
warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared
warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared
warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared
warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared
warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared
warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared
warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared
warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared
warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared
warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared
warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared
warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared
warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared
warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared
warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared
warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared
warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared
warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared
warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared
warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared
warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared
warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared
warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared
warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared
warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared
warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared
warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared
warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared
warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared
warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared
warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared
warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared
warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared
warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared
warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared
warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared
warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared
warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared
warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared
warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared
warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared
warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared
warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared
warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared
[11/23] Cythonizing /gpfsm/dnb32/sbasu1/build/h5py-2.10.0/h5py/h5f.pyx
warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared
warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared
warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared
warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared
warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared
warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared
warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared
warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared
warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared
warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared
warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared
warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared
warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared
warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared
warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared
warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared
warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared
warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared
warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared
warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared
warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared
warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared
warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared
warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared
warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared
warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared
warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared
warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared
warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared
warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared
warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared
warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared
warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared
warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared
warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared
warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared
warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared
warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared
warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared
warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared
warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared
warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared
warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared
warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared
warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared
[12/23] Cythonizing /gpfsm/dnb32/sbasu1/build/h5py-2.10.0/h5py/h5fd.pyx
warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared
warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared
warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared
warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared
warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared
warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared
warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared
warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared
warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared
warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared
warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared
warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared
warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared
warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared
warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared
warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared
warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared
warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared
warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared
warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared
warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared
warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared
warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared
warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared
warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared
warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared
warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared
warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared
warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared
warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared
warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared
warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared
warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared
warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared
warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared
warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared
warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared
warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared
warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared
warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared
warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared
warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared
warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared
warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared
warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared
warning: h5py/h5fd.pxd:18:4: 'H5FD_MEM_NOLIST' redeclared
warning: h5py/h5fd.pxd:19:4: 'H5FD_MEM_DEFAULT' redeclared
warning: h5py/h5fd.pxd:20:4: 'H5FD_MEM_SUPER' redeclared
warning: h5py/h5fd.pxd:21:4: 'H5FD_MEM_BTREE' redeclared
warning: h5py/h5fd.pxd:22:4: 'H5FD_MEM_DRAW' redeclared
warning: h5py/h5fd.pxd:23:4: 'H5FD_MEM_GHEAP' redeclared
warning: h5py/h5fd.pxd:24:4: 'H5FD_MEM_LHEAP' redeclared
warning: h5py/h5fd.pxd:25:4: 'H5FD_MEM_OHDR' redeclared
warning: h5py/h5fd.pxd:26:4: 'H5FD_MEM_NTYPES' redeclared
warning: h5py/h5fd.pxd:31:8: 'H5FD_CORE' redeclared
warning: h5py/h5fd.pxd:32:8: 'H5FD_FAMILY' redeclared
warning: h5py/h5fd.pxd:34:8: 'H5FD_LOG' redeclared
warning: h5py/h5fd.pxd:35:8: 'H5FD_MPIO' redeclared
warning: h5py/h5fd.pxd:37:8: 'H5FD_MULTI' redeclared
warning: h5py/h5fd.pxd:38:8: 'H5FD_SEC2' redeclared
warning: h5py/h5fd.pxd:39:8: 'H5FD_STDIO' redeclared
warning: h5py/h5fd.pxd:44:6: 'H5FD_LOG_LOC_READ' redeclared
warning: h5py/h5fd.pxd:45:6: 'H5FD_LOG_LOC_WRITE' redeclared
warning: h5py/h5fd.pxd:46:6: 'H5FD_LOG_LOC_SEEK' redeclared
warning: h5py/h5fd.pxd:47:6: 'H5FD_LOG_LOC_IO' redeclared
warning: h5py/h5fd.pxd:50:6: 'H5FD_LOG_FILE_READ' redeclared
warning: h5py/h5fd.pxd:51:6: 'H5FD_LOG_FILE_WRITE' redeclared
warning: h5py/h5fd.pxd:52:6: 'H5FD_LOG_FILE_IO' redeclared
warning: h5py/h5fd.pxd:55:6: 'H5FD_LOG_FLAVOR' redeclared
warning: h5py/h5fd.pxd:58:6: 'H5FD_LOG_NUM_READ' redeclared
warning: h5py/h5fd.pxd:59:6: 'H5FD_LOG_NUM_WRITE' redeclared
warning: h5py/h5fd.pxd:60:6: 'H5FD_LOG_NUM_SEEK' redeclared
warning: h5py/h5fd.pxd:61:6: 'H5FD_LOG_NUM_IO' redeclared
warning: h5py/h5fd.pxd:64:6: 'H5FD_LOG_TIME_OPEN' redeclared
warning: h5py/h5fd.pxd:65:6: 'H5FD_LOG_TIME_READ' redeclared
warning: h5py/h5fd.pxd:66:6: 'H5FD_LOG_TIME_WRITE' redeclared
warning: h5py/h5fd.pxd:67:6: 'H5FD_LOG_TIME_SEEK' redeclared
warning: h5py/h5fd.pxd:68:6: 'H5FD_LOG_TIME_CLOSE' redeclared
warning: h5py/h5fd.pxd:69:6: 'H5FD_LOG_TIME_IO' redeclared
warning: h5py/h5fd.pxd:72:6: 'H5FD_LOG_ALLOC' redeclared
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[13/23] Cythonizing /gpfsm/dnb32/sbasu1/build/h5py-2.10.0/h5py/h5g.pyx
warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared
warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared
warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared
warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared
warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared
warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared
warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared
warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared
warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared
warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared
warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared
warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared
warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared
warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared
warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared
warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared
warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared
warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared
warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared
warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared
warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared
warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared
warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared
warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared
warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared
warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared
warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared
warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared
warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared
warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared
warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared
warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared
warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared
warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared
warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared
warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared
warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared
warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared
warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared
warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared
warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared
warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared
warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared
warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared
warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared
[14/23] Cythonizing /gpfsm/dnb32/sbasu1/build/h5py-2.10.0/h5py/h5i.pyx
warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared
warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared
warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared
warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared
warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared
warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared
warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared
warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared
warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared
warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared
warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared
warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared
warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared
warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared
warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared
warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared
warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared
warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared
warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared
warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared
warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared
warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared
warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared
warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared
warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared
warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared
warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared
warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared
warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared
warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared
warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared
warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared
warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared
warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared
warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared
warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared
warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared
warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared
warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared
warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared
warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared
warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared
warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared
warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared
warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared
[15/23] Cythonizing /gpfsm/dnb32/sbasu1/build/h5py-2.10.0/h5py/h5l.pyx
warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared
warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared
warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared
warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared
warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared
warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared
warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared
warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared
warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared
warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared
warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared
warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared
warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared
warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared
warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared
warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared
warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared
warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared
warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared
warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared
warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared
warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared
warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared
warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared
warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared
warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared
warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared
warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared
warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared
warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared
warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared
warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared
warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared
warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared
warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared
warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared
warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared
warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared
warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared
warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared
warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared
warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared
warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared
warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared
warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared
[16/23] Cythonizing /gpfsm/dnb32/sbasu1/build/h5py-2.10.0/h5py/h5o.pyx
warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared
warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared
warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared
warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared
warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared
warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared
warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared
warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared
warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared
warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared
warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared
warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared
warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared
warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared
warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared
warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared
warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared
warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared
warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared
warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared
warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared
warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared
warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared
warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared
warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared
warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared
warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared
warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared
warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared
warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared
warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared
warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared
warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared
warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared
warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared
warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared
warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared
warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared
warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared
warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared
warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared
warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared
warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared
warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared
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[17/23] Cythonizing /gpfsm/dnb32/sbasu1/build/h5py-2.10.0/h5py/h5p.pyx
warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared
warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared
warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared
warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared
warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared
warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared
warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared
warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared
warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared
warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared
warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared
warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared
warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared
warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared
warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared
warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared
warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared
warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared
warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared
warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared
warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared
warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared
warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared
warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared
warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared
warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared
warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared
warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared
warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared
warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared
warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared
warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared
warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared
warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared
warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared
warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared
warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared
warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared
warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared
warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared
warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared
warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared
warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared
warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared
warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared
[18/23] Cythonizing /gpfsm/dnb32/sbasu1/build/h5py-2.10.0/h5py/h5pl.pyx
warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared
warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared
warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared
warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared
warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared
warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared
warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared
warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared
warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared
warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared
warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared
warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared
warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared
warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared
warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared
warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared
warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared
warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared
warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared
warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared
warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared
warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared
warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared
warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared
warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared
warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared
warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared
warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared
warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared
warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared
warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared
warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared
warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared
warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared
warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared
warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared
warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared
warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared
warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared
warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared
warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared
warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared
warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared
warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared
warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared
[19/23] Cythonizing /gpfsm/dnb32/sbasu1/build/h5py-2.10.0/h5py/h5r.pyx
warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared
warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared
warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared
warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared
warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared
warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared
warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared
warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared
warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared
warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared
warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared
warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared
warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared
warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared
warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared
warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared
warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared
warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared
warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared
warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared
warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared
warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared
warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared
warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared
warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared
warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared
warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared
warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared
warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared
warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared
warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared
warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared
warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared
warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared
warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared
warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared
warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared
warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared
warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared
warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared
warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared
warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared
warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared
warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared
warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared
[20/23] Cythonizing /gpfsm/dnb32/sbasu1/build/h5py-2.10.0/h5py/h5s.pyx
warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared
warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared
warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared
warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared
warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared
warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared
warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared
warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared
warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared
warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared
warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared
warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared
warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared
warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared
warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared
warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared
warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared
warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared
warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared
warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared
warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared
warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared
warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared
warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared
warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared
warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared
warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared
warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared
warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared
warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared
warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared
warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared
warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared
warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared
warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared
warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared
warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared
warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared
warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared
warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared
warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared
warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared
warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared
warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared
warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared
[21/23] Cythonizing /gpfsm/dnb32/sbasu1/build/h5py-2.10.0/h5py/h5t.pyx
warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared
warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared
warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared
warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared
warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared
warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared
warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared
warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared
warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared
warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared
warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared
warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared
warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared
warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared
warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared
warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared
warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared
warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared
warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared
warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared
warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared
warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared
warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared
warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared
warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared
warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared
warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared
warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared
warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared
warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared
warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared
warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared
warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared
warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared
warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared
warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared
warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared
warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared
warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared
warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared
warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared
warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared
warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared
warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared
warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared
[22/23] Cythonizing /gpfsm/dnb32/sbasu1/build/h5py-2.10.0/h5py/h5z.pyx
warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared
warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared
warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared
warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared
warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared
warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared
warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared
warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared
warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared
warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared
warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared
warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared
warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared
warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared
warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared
warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared
warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared
warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared
warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared
warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared
warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared
warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared
warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared
warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared
warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared
warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared
warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared
warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared
warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared
warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared
warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared
warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared
warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared
warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared
warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared
warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared
warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared
warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared
warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared
warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared
warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared
warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared
warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared
warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared
warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared
[23/23] Cythonizing /gpfsm/dnb32/sbasu1/build/h5py-2.10.0/h5py/utils.pyx
warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared
warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared
warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared
warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared
warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared
warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared
warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared
warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared
warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared
warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared
warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared
warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared
warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared
warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared
warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared
warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared
warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared
warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared
warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared
warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared
warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared
warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared
warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared
warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared
warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared
warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared
warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared
warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared
warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared
warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared
warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared
warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared
warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared
warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared
warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared
warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared
warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared
warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared
warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared
warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared
warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared
warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared
warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared
warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared
warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared
warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared
building 'h5py.defs' extension
/usr/local/other/gcc/9.2.0/bin/gcc -fno-strict-aliasing -O3 -g -fPIC -fomit-frame-pointer -msse4 -mavx -m64 -mlong-double-128 -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -fPIC -DH5_USE_16_API -I./h5py -I/discover/nobackup/projects/tm5var4d/packages/hdf5/1.12.0/include -I/gpfsm/dnb32/sbasu1/build/h5py-2.10.0/lzf -I/gpfsm/dnb04/projects/p90/packages/python/2.7.17/lib/python2.7/site-packages/numpy-1.16.6-py2.7-linux-x86_64.egg/numpy/core/include -I/discover/nobackup/projects/tm5var4d/packages/python/2.7.17/include/python2.7 -c /gpfsm/dnb32/sbasu1/build/h5py-2.10.0/h5py/defs.c -o build/temp.linux-x86_64-2.7/gpfsm/dnb32/sbasu1/build/h5py-2.10.0/h5py/defs.o
In file included from /gpfsm/dnb04/projects/p90/packages/python/2.7.17/lib/python2.7/site-packages/numpy-1.16.6-py2.7-linux-x86_64.egg/numpy/core/include/numpy/ndarraytypes.h:1822,
                 from /gpfsm/dnb04/projects/p90/packages/python/2.7.17/lib/python2.7/site-packages/numpy-1.16.6-py2.7-linux-x86_64.egg/numpy/core/include/numpy/ndarrayobject.h:12,
                 from /gpfsm/dnb04/projects/p90/packages/python/2.7.17/lib/python2.7/site-packages/numpy-1.16.6-py2.7-linux-x86_64.egg/numpy/core/include/numpy/arrayobject.h:4,
                 from /gpfsm/dnb32/sbasu1/build/h5py-2.10.0/h5py/api_compat.h:26,
                 from /gpfsm/dnb32/sbasu1/build/h5py-2.10.0/h5py/defs.c:642:
/gpfsm/dnb04/projects/p90/packages/python/2.7.17/lib/python2.7/site-packages/numpy-1.16.6-py2.7-linux-x86_64.egg/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
   17 | #warning "Using deprecated NumPy API, disable it with " \
      |  ^~~~~~~
In file included from /discover/nobackup/projects/tm5var4d/packages/hdf5/1.12.0/include/H5public.h:32,
                 from /discover/nobackup/projects/tm5var4d/packages/hdf5/1.12.0/include/hdf5.h:22,
                 from /gpfsm/dnb32/sbasu1/build/h5py-2.10.0/h5py/api_compat.h:27,
                 from /gpfsm/dnb32/sbasu1/build/h5py-2.10.0/h5py/defs.c:642:
/gpfsm/dnb32/sbasu1/build/h5py-2.10.0/h5py/defs.c: In function ‘__pyx_f_4h5py_4defs_H5Oget_info’:
/discover/nobackup/projects/tm5var4d/packages/hdf5/1.12.0/include/H5version.h:746:23: error: too few arguments to function ‘H5Oget_info3’
  746 |   #define H5Oget_info H5Oget_info3
      |                       ^~~~~~~~~~~~
/gpfsm/dnb32/sbasu1/build/h5py-2.10.0/h5py/defs.c:16059:15: note: in expansion of macro ‘H5Oget_info’
16059 |   __pyx_t_1 = H5Oget_info(__pyx_v_loc_id, __pyx_v_oinfo); if (unlikely(PyErr_Occurred())) __PYX_ERR(0, 1509, __pyx_L1_error)
      |               ^~~~~~~~~~~
In file included from /discover/nobackup/projects/tm5var4d/packages/hdf5/1.12.0/include/H5Apublic.h:22,
                 from /discover/nobackup/projects/tm5var4d/packages/hdf5/1.12.0/include/hdf5.h:23,
                 from /gpfsm/dnb32/sbasu1/build/h5py-2.10.0/h5py/api_compat.h:27,
                 from /gpfsm/dnb32/sbasu1/build/h5py-2.10.0/h5py/defs.c:642:
/discover/nobackup/projects/tm5var4d/packages/hdf5/1.12.0/include/H5Opublic.h:187:15: note: declared here
  187 | H5_DLL herr_t H5Oget_info3(hid_t loc_id, H5O_info2_t *oinfo, unsigned fields);
      |               ^~~~~~~~~~~~
In file included from /discover/nobackup/projects/tm5var4d/packages/hdf5/1.12.0/include/H5public.h:32,
                 from /discover/nobackup/projects/tm5var4d/packages/hdf5/1.12.0/include/hdf5.h:22,
                 from /gpfsm/dnb32/sbasu1/build/h5py-2.10.0/h5py/api_compat.h:27,
                 from /gpfsm/dnb32/sbasu1/build/h5py-2.10.0/h5py/defs.c:642:
/gpfsm/dnb32/sbasu1/build/h5py-2.10.0/h5py/defs.c: In function ‘__pyx_f_4h5py_4defs_H5Oget_info_by_name’:
/discover/nobackup/projects/tm5var4d/packages/hdf5/1.12.0/include/H5version.h:772:31: error: too few arguments to function ‘H5Oget_info_by_name3’
  772 |   #define H5Oget_info_by_name H5Oget_info_by_name3
      |                               ^~~~~~~~~~~~~~~~~~~~
/gpfsm/dnb32/sbasu1/build/h5py-2.10.0/h5py/defs.c:16171:15: note: in expansion of macro ‘H5Oget_info_by_name’
16171 |   __pyx_t_1 = H5Oget_info_by_name(__pyx_v_loc_id, __pyx_v_name, __pyx_v_oinfo, __pyx_v_lapl_id); if (unlikely(PyErr_Occurred())) __PYX_ERR(0, 1520, __pyx_L1_error)
      |               ^~~~~~~~~~~~~~~~~~~
In file included from /discover/nobackup/projects/tm5var4d/packages/hdf5/1.12.0/include/H5Apublic.h:22,
                 from /discover/nobackup/projects/tm5var4d/packages/hdf5/1.12.0/include/hdf5.h:23,
                 from /gpfsm/dnb32/sbasu1/build/h5py-2.10.0/h5py/api_compat.h:27,
                 from /gpfsm/dnb32/sbasu1/build/h5py-2.10.0/h5py/defs.c:642:
/discover/nobackup/projects/tm5var4d/packages/hdf5/1.12.0/include/H5Opublic.h:188:15: note: declared here
  188 | H5_DLL herr_t H5Oget_info_by_name3(hid_t loc_id, const char *name, H5O_info2_t *oinfo,
      |               ^~~~~~~~~~~~~~~~~~~~
In file included from /discover/nobackup/projects/tm5var4d/packages/hdf5/1.12.0/include/H5public.h:32,
                 from /discover/nobackup/projects/tm5var4d/packages/hdf5/1.12.0/include/hdf5.h:22,
                 from /gpfsm/dnb32/sbasu1/build/h5py-2.10.0/h5py/api_compat.h:27,
                 from /gpfsm/dnb32/sbasu1/build/h5py-2.10.0/h5py/defs.c:642:
/gpfsm/dnb32/sbasu1/build/h5py-2.10.0/h5py/defs.c: In function ‘__pyx_f_4h5py_4defs_H5Oget_info_by_idx’:
/discover/nobackup/projects/tm5var4d/packages/hdf5/1.12.0/include/H5version.h:759:30: error: too few arguments to function ‘H5Oget_info_by_idx3’
  759 |   #define H5Oget_info_by_idx H5Oget_info_by_idx3
      |                              ^~~~~~~~~~~~~~~~~~~
/gpfsm/dnb32/sbasu1/build/h5py-2.10.0/h5py/defs.c:16283:15: note: in expansion of macro ‘H5Oget_info_by_idx’
16283 |   __pyx_t_1 = H5Oget_info_by_idx(__pyx_v_loc_id, __pyx_v_group_name, __pyx_v_idx_type, __pyx_v_order, __pyx_v_n, __pyx_v_oinfo, __pyx_v_lapl_id); if (unlikely(PyErr_Occurred())) __PYX_ERR(0, 1531, __pyx_L1_error)
      |               ^~~~~~~~~~~~~~~~~~
In file included from /discover/nobackup/projects/tm5var4d/packages/hdf5/1.12.0/include/H5Apublic.h:22,
                 from /discover/nobackup/projects/tm5var4d/packages/hdf5/1.12.0/include/hdf5.h:23,
                 from /gpfsm/dnb32/sbasu1/build/h5py-2.10.0/h5py/api_compat.h:27,
                 from /gpfsm/dnb32/sbasu1/build/h5py-2.10.0/h5py/defs.c:642:
/discover/nobackup/projects/tm5var4d/packages/hdf5/1.12.0/include/H5Opublic.h:190:15: note: declared here
  190 | H5_DLL herr_t H5Oget_info_by_idx3(hid_t loc_id, const char *group_name,
      |               ^~~~~~~~~~~~~~~~~~~
In file included from /discover/nobackup/projects/tm5var4d/packages/hdf5/1.12.0/include/H5public.h:32,
                 from /discover/nobackup/projects/tm5var4d/packages/hdf5/1.12.0/include/hdf5.h:22,
                 from /gpfsm/dnb32/sbasu1/build/h5py-2.10.0/h5py/api_compat.h:27,
                 from /gpfsm/dnb32/sbasu1/build/h5py-2.10.0/h5py/defs.c:642:
/gpfsm/dnb32/sbasu1/build/h5py-2.10.0/h5py/defs.c: In function ‘__pyx_f_4h5py_4defs_H5Ovisit’:
/discover/nobackup/projects/tm5var4d/packages/hdf5/1.12.0/include/H5version.h:785:20: error: too few arguments to function ‘H5Ovisit3’
  785 |   #define H5Ovisit H5Ovisit3
      |                    ^~~~~~~~~
/gpfsm/dnb32/sbasu1/build/h5py-2.10.0/h5py/defs.c:17291:15: note: in expansion of macro ‘H5Ovisit’
17291 |   __pyx_t_1 = H5Ovisit(__pyx_v_obj_id, __pyx_v_idx_type, __pyx_v_order, __pyx_v_op, __pyx_v_op_data); if (unlikely(PyErr_Occurred())) __PYX_ERR(0, 1630, __pyx_L1_error)
      |               ^~~~~~~~
In file included from /discover/nobackup/projects/tm5var4d/packages/hdf5/1.12.0/include/H5Apublic.h:22,
                 from /discover/nobackup/projects/tm5var4d/packages/hdf5/1.12.0/include/hdf5.h:23,
                 from /gpfsm/dnb32/sbasu1/build/h5py-2.10.0/h5py/api_compat.h:27,
                 from /gpfsm/dnb32/sbasu1/build/h5py-2.10.0/h5py/defs.c:642:
/discover/nobackup/projects/tm5var4d/packages/hdf5/1.12.0/include/H5Opublic.h:211:15: note: declared here
  211 | H5_DLL herr_t H5Ovisit3(hid_t obj_id, H5_index_t idx_type, H5_iter_order_t order,
      |               ^~~~~~~~~
In file included from /discover/nobackup/projects/tm5var4d/packages/hdf5/1.12.0/include/H5public.h:32,
                 from /discover/nobackup/projects/tm5var4d/packages/hdf5/1.12.0/include/hdf5.h:22,
                 from /gpfsm/dnb32/sbasu1/build/h5py-2.10.0/h5py/api_compat.h:27,
                 from /gpfsm/dnb32/sbasu1/build/h5py-2.10.0/h5py/defs.c:642:
/gpfsm/dnb32/sbasu1/build/h5py-2.10.0/h5py/defs.c: In function ‘__pyx_f_4h5py_4defs_H5Ovisit_by_name’:
/discover/nobackup/projects/tm5var4d/packages/hdf5/1.12.0/include/H5version.h:798:28: error: too few arguments to function ‘H5Ovisit_by_name3’
  798 |   #define H5Ovisit_by_name H5Ovisit_by_name3
      |                            ^~~~~~~~~~~~~~~~~
/gpfsm/dnb32/sbasu1/build/h5py-2.10.0/h5py/defs.c:17403:15: note: in expansion of macro ‘H5Ovisit_by_name’
17403 |   __pyx_t_1 = H5Ovisit_by_name(__pyx_v_loc_id, __pyx_v_obj_name, __pyx_v_idx_type, __pyx_v_order, __pyx_v_op, __pyx_v_op_data, __pyx_v_lapl_id); if (unlikely(PyErr_Occurred())) __PYX_ERR(0, 1641, __pyx_L1_error)
      |               ^~~~~~~~~~~~~~~~
In file included from /discover/nobackup/projects/tm5var4d/packages/hdf5/1.12.0/include/H5Apublic.h:22,
                 from /discover/nobackup/projects/tm5var4d/packages/hdf5/1.12.0/include/hdf5.h:23,
                 from /gpfsm/dnb32/sbasu1/build/h5py-2.10.0/h5py/api_compat.h:27,
                 from /gpfsm/dnb32/sbasu1/build/h5py-2.10.0/h5py/defs.c:642:
/discover/nobackup/projects/tm5var4d/packages/hdf5/1.12.0/include/H5Opublic.h:213:15: note: declared here
  213 | H5_DLL herr_t H5Ovisit_by_name3(hid_t loc_id, const char *obj_name,
      |               ^~~~~~~~~~~~~~~~~
/gpfsm/dnb32/sbasu1/build/h5py-2.10.0/h5py/defs.c: In function ‘__pyx_f_4h5py_4defs_H5Pget_driver_info’:
/gpfsm/dnb32/sbasu1/build/h5py-2.10.0/h5py/defs.c:21211:13: warning: assignment discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers]
21211 |   __pyx_t_1 = H5Pget_driver_info(__pyx_v_plist_id); if (unlikely(PyErr_Occurred())) __PYX_ERR(0, 2016, __pyx_L1_error)
      |             ^
In file included from /discover/nobackup/projects/tm5var4d/packages/hdf5/1.12.0/include/H5public.h:32,
                 from /discover/nobackup/projects/tm5var4d/packages/hdf5/1.12.0/include/hdf5.h:22,
                 from /gpfsm/dnb32/sbasu1/build/h5py-2.10.0/h5py/api_compat.h:27,
                 from /gpfsm/dnb32/sbasu1/build/h5py-2.10.0/h5py/defs.c:642:
/gpfsm/dnb32/sbasu1/build/h5py-2.10.0/h5py/defs.c: In function ‘__pyx_f_4h5py_4defs_H5Sencode’:
/discover/nobackup/projects/tm5var4d/packages/hdf5/1.12.0/include/H5version.h:888:21: error: too few arguments to function ‘H5Sencode2’
  888 |   #define H5Sencode H5Sencode2
      |                     ^~~~~~~~~~
/gpfsm/dnb32/sbasu1/build/h5py-2.10.0/h5py/defs.c:33638:15: note: in expansion of macro ‘H5Sencode’
33638 |   __pyx_t_1 = H5Sencode(__pyx_v_obj_id, __pyx_v_buf, __pyx_v_nalloc); if (unlikely(PyErr_Occurred())) __PYX_ERR(0, 3303, __pyx_L1_error)
      |               ^~~~~~~~~
In file included from /discover/nobackup/projects/tm5var4d/packages/hdf5/1.12.0/include/hdf5.h:38,
                 from /gpfsm/dnb32/sbasu1/build/h5py-2.10.0/h5py/api_compat.h:27,
                 from /gpfsm/dnb32/sbasu1/build/h5py-2.10.0/h5py/defs.c:642:
/discover/nobackup/projects/tm5var4d/packages/hdf5/1.12.0/include/H5Spublic.h:129:15: note: declared here
  129 | H5_DLL herr_t H5Sencode2(hid_t obj_id, void *buf, size_t *nalloc, hid_t fapl);
      |               ^~~~~~~~~~
In file included from /gpfsm/dnb04/projects/p90/packages/python/2.7.17/lib/python2.7/site-packages/numpy-1.16.6-py2.7-linux-x86_64.egg/numpy/core/include/numpy/ndarrayobject.h:21,
                 from /gpfsm/dnb04/projects/p90/packages/python/2.7.17/lib/python2.7/site-packages/numpy-1.16.6-py2.7-linux-x86_64.egg/numpy/core/include/numpy/arrayobject.h:4,
                 from /gpfsm/dnb32/sbasu1/build/h5py-2.10.0/h5py/api_compat.h:26,
                 from /gpfsm/dnb32/sbasu1/build/h5py-2.10.0/h5py/defs.c:642:
At top level:
/gpfsm/dnb04/projects/p90/packages/python/2.7.17/lib/python2.7/site-packages/numpy-1.16.6-py2.7-linux-x86_64.egg/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: ‘_import_array’ defined but not used [-Wunused-function]
 1463 | _import_array(void)
      | ^~~~~~~~~~~~~
error: command '/usr/local/other/gcc/9.2.0/bin/gcc' failed with exit status 1

Issue Analytics

  • State:closed
  • Created 4 years ago
  • Reactions:3
  • Comments:13 (6 by maintainers)

github_iconTop GitHub Comments

1reaction
molaeialicommented, May 6, 2021

Hey there, I know version 3.2.1 is out, but I want to use tensorflow 2.4.0 and for whatever reason it’s depending on 2.10.0

  Because hsd depends on tensorflow (2.4.0) which depends on h5py (>=2.10.0,<2.11.0), h5py is required.
  So, because hsd depends on h5py (^3.2.1), version solving failed.

I’m using python 3.9 and I’m hitting the same issue, can anyone help?

    /tmp/pip-req-build-0zm7yohx/h5py/h5i.c:3190:43: error: ‘H5I_REFERENCE’ undeclared (first use in this function); did you mean ‘H5T_REFERENCE’?
     3190 |   __pyx_t_2 = __Pyx_PyInt_From_H5I_type_t(H5I_REFERENCE); if (unlikely(!__pyx_t_2)) __PYX_ERR(0, 25, __pyx_L1_error)
          |                                           ^~~~~~~~~~~~~
          |                                           H5T_REFERENCE
    /tmp/pip-req-build-0zm7yohx/h5py/h5i.c:3190:43: note: each undeclared identifier is reported only once for each function it appears in
    In file included from /home/ali/.cache/pypoetry/virtualenvs/hsd-cpxpEE6O-py3.9/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:21,
                     from /home/ali/.cache/pypoetry/virtualenvs/hsd-cpxpEE6O-py3.9/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:4,
                     from /tmp/pip-req-build-0zm7yohx/h5py/api_compat.h:26,
                     from /tmp/pip-req-build-0zm7yohx/h5py/h5i.c:656:
    At top level:
    /home/ali/.cache/pypoetry/virtualenvs/hsd-cpxpEE6O-py3.9/lib/python3.9/site-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: ‘_import_array’ defined but not used [-Wunused-function]
     1463 | _import_array(void)
          | ^~~~~~~~~~~~~
    error: command '/usr/lib/ccache/bin/gcc' failed with exit code 1
    ----------------------------------------
    ERROR: Failed building wheel for h5py
    Running setup.py clean for h5py
  Failed to build h5py
  Installing collected packages: h5py
      Running setup.py install for h5py: started
      Running setup.py install for h5py: finished with status 'error'
      ERROR: Command errored out with exit status 1:
       command: /home/ali/.cache/pypoetry/virtualenvs/hsd-cpxpEE6O-py3.9/bin/python -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-req-build-0zm7yohx/setup.py'"'"'; __file__='"'"'/tmp/pip-req-build-0zm7yohx/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' install --record /tmp/pip-record-x96kivyl/install-record.txt --single-version-externally-managed --compile --install-headers /home/ali/.cache/pypoetry/virtualenvs/hsd-cpxpEE6O-py3.9/include/site/python3.9/h5py
           cwd: /tmp/pip-req-build-0zm7yohx/
      Complete output (1504 lines):
      running install
      running build
      running build_py
      creating build
      creating build/lib.linux-x86_64-3.9
      creating build/lib.linux-x86_64-3.9/h5py
      copying h5py/version.py -> build/lib.linux-x86_64-3.9/h5py
      copying h5py/ipy_completer.py -> build/lib.linux-x86_64-3.9/h5py
      copying h5py/highlevel.py -> build/lib.linux-x86_64-3.9/h5py
      copying h5py/h5py_warnings.py -> build/lib.linux-x86_64-3.9/h5py
      copying h5py/__init__.py -> build/lib.linux-x86_64-3.9/h5py
      creating build/lib.linux-x86_64-3.9/h5py/_hl
      copying h5py/_hl/vds.py -> build/lib.linux-x86_64-3.9/h5py/_hl
      copying h5py/_hl/selections2.py -> build/lib.linux-x86_64-3.9/h5py/_hl
      copying h5py/_hl/selections.py -> build/lib.linux-x86_64-3.9/h5py/_hl
      copying h5py/_hl/group.py -> build/lib.linux-x86_64-3.9/h5py/_hl
      copying h5py/_hl/filters.py -> build/lib.linux-x86_64-3.9/h5py/_hl
      copying h5py/_hl/files.py -> build/lib.linux-x86_64-3.9/h5py/_hl
      copying h5py/_hl/dims.py -> build/lib.linux-x86_64-3.9/h5py/_hl
      copying h5py/_hl/datatype.py -> build/lib.linux-x86_64-3.9/h5py/_hl
      copying h5py/_hl/dataset.py -> build/lib.linux-x86_64-3.9/h5py/_hl
      copying h5py/_hl/compat.py -> build/lib.linux-x86_64-3.9/h5py/_hl
      copying h5py/_hl/base.py -> build/lib.linux-x86_64-3.9/h5py/_hl
      copying h5py/_hl/attrs.py -> build/lib.linux-x86_64-3.9/h5py/_hl
      copying h5py/_hl/__init__.py -> build/lib.linux-x86_64-3.9/h5py/_hl
      creating build/lib.linux-x86_64-3.9/h5py/tests
      copying h5py/tests/test_threads.py -> build/lib.linux-x86_64-3.9/h5py/tests
      copying h5py/tests/test_slicing.py -> build/lib.linux-x86_64-3.9/h5py/tests
      copying h5py/tests/test_selections.py -> build/lib.linux-x86_64-3.9/h5py/tests
      copying h5py/tests/test_objects.py -> build/lib.linux-x86_64-3.9/h5py/tests
      copying h5py/tests/test_h5t.py -> build/lib.linux-x86_64-3.9/h5py/tests
      copying h5py/tests/test_h5pl.py -> build/lib.linux-x86_64-3.9/h5py/tests
      copying h5py/tests/test_h5p.py -> build/lib.linux-x86_64-3.9/h5py/tests
      copying h5py/tests/test_h5f.py -> build/lib.linux-x86_64-3.9/h5py/tests
      copying h5py/tests/test_h5d_direct_chunk.py -> build/lib.linux-x86_64-3.9/h5py/tests
      copying h5py/tests/test_h5.py -> build/lib.linux-x86_64-3.9/h5py/tests
      copying h5py/tests/test_group.py -> build/lib.linux-x86_64-3.9/h5py/tests
      copying h5py/tests/test_filters.py -> build/lib.linux-x86_64-3.9/h5py/tests
      copying h5py/tests/test_file_image.py -> build/lib.linux-x86_64-3.9/h5py/tests
      copying h5py/tests/test_file2.py -> build/lib.linux-x86_64-3.9/h5py/tests
      copying h5py/tests/test_file.py -> build/lib.linux-x86_64-3.9/h5py/tests
      copying h5py/tests/test_dtype.py -> build/lib.linux-x86_64-3.9/h5py/tests
      copying h5py/tests/test_dims_dimensionproxy.py -> build/lib.linux-x86_64-3.9/h5py/tests
      copying h5py/tests/test_dimension_scales.py -> build/lib.linux-x86_64-3.9/h5py/tests
      copying h5py/tests/test_deprecation.py -> build/lib.linux-x86_64-3.9/h5py/tests
      copying h5py/tests/test_datatype.py -> build/lib.linux-x86_64-3.9/h5py/tests
      copying h5py/tests/test_dataset_swmr.py -> build/lib.linux-x86_64-3.9/h5py/tests
      copying h5py/tests/test_dataset_getitem.py -> build/lib.linux-x86_64-3.9/h5py/tests
      copying h5py/tests/test_dataset.py -> build/lib.linux-x86_64-3.9/h5py/tests
      copying h5py/tests/test_completions.py -> build/lib.linux-x86_64-3.9/h5py/tests
      copying h5py/tests/test_base.py -> build/lib.linux-x86_64-3.9/h5py/tests
      copying h5py/tests/test_attrs_data.py -> build/lib.linux-x86_64-3.9/h5py/tests
      copying h5py/tests/test_attrs.py -> build/lib.linux-x86_64-3.9/h5py/tests
      copying h5py/tests/test_attribute_create.py -> build/lib.linux-x86_64-3.9/h5py/tests
      copying h5py/tests/common.py -> build/lib.linux-x86_64-3.9/h5py/tests
      copying h5py/tests/__init__.py -> build/lib.linux-x86_64-3.9/h5py/tests
      creating build/lib.linux-x86_64-3.9/h5py/tests/test_vds
      copying h5py/tests/test_vds/test_virtual_source.py -> build/lib.linux-x86_64-3.9/h5py/tests/test_vds
      copying h5py/tests/test_vds/test_lowlevel_vds.py -> build/lib.linux-x86_64-3.9/h5py/tests/test_vds
      copying h5py/tests/test_vds/test_highlevel_vds.py -> build/lib.linux-x86_64-3.9/h5py/tests/test_vds
      copying h5py/tests/test_vds/__init__.py -> build/lib.linux-x86_64-3.9/h5py/tests/test_vds
      running build_ext
      Loading library to get version: libhdf5.so
      Autodetected HDF5 1.12.0
      ********************************************************************************
                             Summary of the h5py configuration
      
          Path to HDF5: None
          HDF5 Version: '1.12.0'
           MPI Enabled: False
      Rebuild Required: True
      
      ********************************************************************************
      Executing cythonize()
      [ 1/23] Cythonizing /tmp/pip-req-build-0zm7yohx/h5py/_conv.pyx
      warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared
      warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared
      warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared
      warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared
      warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared
      warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared
      warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared
      warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared
      warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared
      warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared
      warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared
      warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared
      warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared
      warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared
      warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared
      warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared
      warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared
      warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared
      warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared
      warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared
      warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared
      warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared
      warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared
      warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared
      warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared
      warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared
      warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared
      warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared
      warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared
      warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared
      warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared
      warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared
      warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared
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      warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared
      warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared
      warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared
      warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared
      warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared
      warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared
      warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared
      warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared
      warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared
      warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared
      warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared
      warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared
      warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared
      warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared
      [ 6/23] Cythonizing /tmp/pip-req-build-0zm7yohx/h5py/h5.pyx
      warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared
      warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared
      warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared
      warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared
      warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared
      warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared
      warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared
      warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared
      warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared
      warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared
      warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared
      warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared
      warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared
      warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared
      warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared
      warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared
      warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared
      warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared
      warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared
      warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared
      warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared
      warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared
      warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared
      warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared
      warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared
      warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared
      warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared
      warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared
      warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared
      warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared
      warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared
      warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared
      warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared
      warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared
      warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared
      warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared
      warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared
      warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared
      warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared
      warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared
      warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared
      warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared
      warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared
      warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared
      warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared
      warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared
      warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared
      warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared
      warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared
      warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared
      warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared
      [ 7/23] Cythonizing /tmp/pip-req-build-0zm7yohx/h5py/h5a.pyx
      warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared
      warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared
      warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared
      warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared
      warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared
      warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared
      warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared
      warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared
      warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared
      warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared
      warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared
      warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared
      warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared
      warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared
      warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared
      warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared
      warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared
      warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared
      warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared
      warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared
      warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared
      warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared
      warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared
      warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared
      warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared
      warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared
      warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared
      warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared
      warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared
      warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared
      warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared
      warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared
      warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared
      warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared
      warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared
      warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared
      warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared
      warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared
      warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared
      warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared
      warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared
      warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared
      warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared
      warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared
      warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared
      warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared
      warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared
      warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared
      warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared
      warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared
      warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared
      [ 8/23] Cythonizing /tmp/pip-req-build-0zm7yohx/h5py/h5ac.pyx
      warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared
      warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared
      warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared
      warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared
      warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared
      warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared
      warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared
      warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared
      warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared
      warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared
      warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared
      warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared
      warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared
      warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared
      warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared
      warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared
      warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared
      warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared
      warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared
      warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared
      warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared
      warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared
      warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared
      warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared
      warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared
      warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared
      warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared
      warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared
      warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared
      warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared
      warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared
      warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared
      warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared
      warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared
      warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared
      warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared
      warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared
      warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared
      warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared
      warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared
      warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared
      warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared
      warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared
      warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared
      warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared
      warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared
      warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared
      warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared
      warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared
      warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared
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      [ 9/23] Cythonizing /tmp/pip-req-build-0zm7yohx/h5py/h5d.pyx
      warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared
      warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared
      warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared
      warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared
      warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared
      warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared
      warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared
      warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared
      warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared
      warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared
      warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared
      warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared
      warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared
      warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared
      warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared
      warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared
      warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared
      warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared
      warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared
      warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared
      warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared
      warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared
      warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared
      warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared
      warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared
      warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared
      warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared
      warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared
      warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared
      warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared
      warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared
      warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared
      warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared
      warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared
      warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared
      warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared
      warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared
      warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared
      warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared
      warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared
      warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared
      warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared
      warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared
      warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared
      warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared
      warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared
      warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared
      warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared
      warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared
      warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared
      warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared
      [10/23] Cythonizing /tmp/pip-req-build-0zm7yohx/h5py/h5ds.pyx
      warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared
      warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared
      warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared
      warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared
      warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared
      warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared
      warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared
      warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared
      warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared
      warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared
      warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared
      warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared
      warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared
      warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared
      warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared
      warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared
      warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared
      warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared
      warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared
      warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared
      warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared
      warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared
      warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared
      warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared
      warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared
      warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared
      warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared
      warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared
      warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared
      warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared
      warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared
      warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared
      warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared
      warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared
      warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared
      warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared
      warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared
      warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared
      warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared
      warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared
      warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared
      warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared
      warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared
      warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared
      warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared
      warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared
      warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared
      warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared
      warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared
      warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared
      warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared
      [11/23] Cythonizing /tmp/pip-req-build-0zm7yohx/h5py/h5f.pyx
      warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared
      warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared
      warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared
      warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared
      warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared
      warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared
      warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared
      warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared
      warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared
      warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared
      warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared
      warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared
      warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared
      warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared
      warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared
      warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared
      warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared
      warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared
      warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared
      warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared
      warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared
      warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared
      warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared
      warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared
      warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared
      warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared
      warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared
      warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared
      warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared
      warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared
      warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared
      warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared
      warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared
      warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared
      warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared
      warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared
      warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared
      warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared
      warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared
      warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared
      warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared
      warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared
      warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared
      warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared
      warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared
      warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared
      warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared
      warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared
      warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared
      warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared
      warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared
      [12/23] Cythonizing /tmp/pip-req-build-0zm7yohx/h5py/h5fd.pyx
      warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared
      warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared
      warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared
      warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared
      warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared
      warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared
      warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared
      warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared
      warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared
      warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared
      warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared
      warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared
      warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared
      warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared
      warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared
      warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared
      warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared
      warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared
      warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared
      warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared
      warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared
      warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared
      warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared
      warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared
      warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared
      warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared
      warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared
      warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared
      warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared
      warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared
      warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared
      warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared
      warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared
      warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared
      warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared
      warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared
      warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared
      warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared
      warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared
      warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared
      warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared
      warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared
      warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared
      warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared
      warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared
      warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared
      warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared
      warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared
      warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared
      warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared
      warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared
      warning: h5py/h5fd.pxd:18:4: 'H5FD_MEM_NOLIST' redeclared
      warning: h5py/h5fd.pxd:19:4: 'H5FD_MEM_DEFAULT' redeclared
      warning: h5py/h5fd.pxd:20:4: 'H5FD_MEM_SUPER' redeclared
      warning: h5py/h5fd.pxd:21:4: 'H5FD_MEM_BTREE' redeclared
      warning: h5py/h5fd.pxd:22:4: 'H5FD_MEM_DRAW' redeclared
      warning: h5py/h5fd.pxd:23:4: 'H5FD_MEM_GHEAP' redeclared
      warning: h5py/h5fd.pxd:24:4: 'H5FD_MEM_LHEAP' redeclared
      warning: h5py/h5fd.pxd:25:4: 'H5FD_MEM_OHDR' redeclared
      warning: h5py/h5fd.pxd:26:4: 'H5FD_MEM_NTYPES' redeclared
      warning: h5py/h5fd.pxd:31:8: 'H5FD_CORE' redeclared
      warning: h5py/h5fd.pxd:32:8: 'H5FD_FAMILY' redeclared
      warning: h5py/h5fd.pxd:34:8: 'H5FD_LOG' redeclared
      warning: h5py/h5fd.pxd:35:8: 'H5FD_MPIO' redeclared
      warning: h5py/h5fd.pxd:37:8: 'H5FD_MULTI' redeclared
      warning: h5py/h5fd.pxd:38:8: 'H5FD_SEC2' redeclared
      warning: h5py/h5fd.pxd:39:8: 'H5FD_STDIO' redeclared
      warning: h5py/h5fd.pxd:44:6: 'H5FD_LOG_LOC_READ' redeclared
      warning: h5py/h5fd.pxd:45:6: 'H5FD_LOG_LOC_WRITE' redeclared
      warning: h5py/h5fd.pxd:46:6: 'H5FD_LOG_LOC_SEEK' redeclared
      warning: h5py/h5fd.pxd:47:6: 'H5FD_LOG_LOC_IO' redeclared
      warning: h5py/h5fd.pxd:50:6: 'H5FD_LOG_FILE_READ' redeclared
      warning: h5py/h5fd.pxd:51:6: 'H5FD_LOG_FILE_WRITE' redeclared
      warning: h5py/h5fd.pxd:52:6: 'H5FD_LOG_FILE_IO' redeclared
      warning: h5py/h5fd.pxd:55:6: 'H5FD_LOG_FLAVOR' redeclared
      warning: h5py/h5fd.pxd:58:6: 'H5FD_LOG_NUM_READ' redeclared
      warning: h5py/h5fd.pxd:59:6: 'H5FD_LOG_NUM_WRITE' redeclared
      warning: h5py/h5fd.pxd:60:6: 'H5FD_LOG_NUM_SEEK' redeclared
      warning: h5py/h5fd.pxd:61:6: 'H5FD_LOG_NUM_IO' redeclared
      warning: h5py/h5fd.pxd:64:6: 'H5FD_LOG_TIME_OPEN' redeclared
      warning: h5py/h5fd.pxd:65:6: 'H5FD_LOG_TIME_READ' redeclared
      warning: h5py/h5fd.pxd:66:6: 'H5FD_LOG_TIME_WRITE' redeclared
      warning: h5py/h5fd.pxd:67:6: 'H5FD_LOG_TIME_SEEK' redeclared
      warning: h5py/h5fd.pxd:68:6: 'H5FD_LOG_TIME_CLOSE' redeclared
      warning: h5py/h5fd.pxd:69:6: 'H5FD_LOG_TIME_IO' redeclared
      warning: h5py/h5fd.pxd:72:6: 'H5FD_LOG_ALLOC' redeclared
      warning: h5py/h5fd.pxd:73:6: 'H5FD_LOG_ALL' redeclared
      [13/23] Cythonizing /tmp/pip-req-build-0zm7yohx/h5py/h5g.pyx
      warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared
      warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared
      warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared
      warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared
      warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared
      warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared
      warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared
      warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared
      warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared
      warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared
      warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared
      warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared
      warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared
      warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared
      warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared
      warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared
      warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared
      warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared
      warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared
      warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared
      warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared
      warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared
      warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared
      warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared
      warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared
      warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared
      warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared
      warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared
      warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared
      warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared
      warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared
      warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared
      warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared
      warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared
      warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared
      warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared
      warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared
      warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared
      warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared
      warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared
      warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared
      warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared
      warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared
      warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared
      warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared
      warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared
      warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared
      warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared
      warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared
      warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared
      warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared
      [14/23] Cythonizing /tmp/pip-req-build-0zm7yohx/h5py/h5i.pyx
      warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared
      warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared
      warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared
      warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared
      warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared
      warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared
      warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared
      warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared
      warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared
      warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared
      warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared
      warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared
      warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared
      warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared
      warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared
      warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared
      warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared
      warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared
      warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared
      warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared
      warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared
      warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared
      warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared
      warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared
      warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared
      warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared
      warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared
      warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared
      warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared
      warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared
      warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared
      warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared
      warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared
      warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared
      warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared
      warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared
      warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared
      warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared
      warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared
      warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared
      warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared
      warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared
      warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared
      warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared
      warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared
      warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared
      warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared
      warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared
      warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared
      warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared
      warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared
      [15/23] Cythonizing /tmp/pip-req-build-0zm7yohx/h5py/h5l.pyx
      warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared
      warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared
      warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared
      warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared
      warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared
      warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared
      warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared
      warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared
      warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared
      warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared
      warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared
      warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared
      warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared
      warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared
      warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared
      warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared
      warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared
      warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared
      warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared
      warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared
      warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared
      warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared
      warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared
      warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared
      warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared
      warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared
      warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared
      warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared
      warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared
      warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared
      warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared
      warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared
      warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared
      warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared
      warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared
      warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared
      warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared
      warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared
      warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared
      warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared
      warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared
      warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared
      warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared
      warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared
      warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared
      warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared
      warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared
      warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared
      warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared
      warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared
      warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared
      [16/23] Cythonizing /tmp/pip-req-build-0zm7yohx/h5py/h5o.pyx
      warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared
      warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared
      warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared
      warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared
      warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared
      warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared
      warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared
      warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared
      warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared
      warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared
      warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared
      warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared
      warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared
      warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared
      warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared
      warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared
      warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared
      warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared
      warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared
      warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared
      warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared
      warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared
      warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared
      warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared
      warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared
      warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared
      warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared
      warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared
      warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared
      warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared
      warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared
      warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared
      warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared
      warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared
      warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared
      warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared
      warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared
      warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared
      warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared
      warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared
      warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared
      warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared
      warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared
      warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared
      warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared
      warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared
      warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared
      warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared
      warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared
      warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared
      warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared
      [17/23] Cythonizing /tmp/pip-req-build-0zm7yohx/h5py/h5p.pyx
      warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared
      warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared
      warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared
      warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared
      warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared
      warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared
      warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared
      warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared
      warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared
      warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared
      warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared
      warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared
      warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared
      warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared
      warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared
      warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared
      warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared
      warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared
      warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared
      warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared
      warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared
      warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared
      warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared
      warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared
      warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared
      warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared
      warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared
      warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared
      warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared
      warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared
      warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared
      warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared
      warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared
      warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared
      warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared
      warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared
      warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared
      warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared
      warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared
      warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared
      warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared
      warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared
      warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared
      warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared
      warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared
      warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared
      warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared
      warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared
      warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared
      warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared
      warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared
      [18/23] Cythonizing /tmp/pip-req-build-0zm7yohx/h5py/h5pl.pyx
      warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared
      warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared
      warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared
      warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared
      warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared
      warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared
      warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared
      warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared
      warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared
      warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared
      warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared
      warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared
      warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared
      warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared
      warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared
      warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared
      warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared
      warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared
      warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared
      warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared
      warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared
      warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared
      warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared
      warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared
      warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared
      warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared
      warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared
      warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared
      warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared
      warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared
      warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared
      warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared
      warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared
      warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared
      warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared
      warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared
      warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared
      warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared
      warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared
      warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared
      warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared
      warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared
      warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared
      warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared
      warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared
      warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared
      warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared
      warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared
      warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared
      warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared
      warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared
      warning: h5py/h5pl.pyx:64:14: cpdef variables will not be supported in Cython 3; currently they are no different from cdef variables
      warning: h5py/h5pl.pyx:65:14: cpdef variables will not be supported in Cython 3; currently they are no different from cdef variables
      warning: h5py/h5pl.pyx:80:14: cpdef variables will not be supported in Cython 3; currently they are no different from cdef variables
      [19/23] Cythonizing /tmp/pip-req-build-0zm7yohx/h5py/h5r.pyx
      warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared
      warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared
      warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared
      warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared
      warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared
      warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared
      warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared
      warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared
      warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared
      warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared
      warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared
      warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared
      warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared
      warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared
      warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared
      warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared
      warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared
      warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared
      warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared
      warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared
      warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared
      warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared
      warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared
      warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared
      warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared
      warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared
      warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared
      warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared
      warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared
      warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared
      warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared
      warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared
      warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared
      warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared
      warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared
      warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared
      warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared
      warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared
      warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared
      warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared
      warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared
      warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared
      warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared
      warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared
      warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared
      warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared
      warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared
      warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared
      warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared
      warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared
      warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared
      [20/23] Cythonizing /tmp/pip-req-build-0zm7yohx/h5py/h5s.pyx
      warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared
      warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared
      warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared
      warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared
      warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared
      warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared
      warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared
      warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared
      warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared
      warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared
      warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared
      warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared
      warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared
      warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared
      warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared
      warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared
      warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared
      warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared
      warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared
      warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared
      warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared
      warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared
      warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared
      warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared
      warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared
      warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared
      warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared
      warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared
      warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared
      warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared
      warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared
      warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared
      warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared
      warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared
      warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared
      warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared
      warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared
      warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared
      warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared
      warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared
      warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared
      warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared
      warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared
      warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared
      warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared
      warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared
      warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared
      warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared
      warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared
      warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared
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      [21/23] Cythonizing /tmp/pip-req-build-0zm7yohx/h5py/h5t.pyx
      warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared
      warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared
      warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared
      warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared
      warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared
      warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared
      warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared
      warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared
      warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared
      warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared
      warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared
      warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared
      warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared
      warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared
      warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared
      warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared
      warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared
      warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared
      warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared
      warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared
      warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared
      warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared
      warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared
      warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared
      warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared
      warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared
      warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared
      warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared
      warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared
      warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared
      warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared
      warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared
      warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared
      warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared
      warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared
      warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared
      warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared
      warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared
      warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared
      warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared
      warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared
      warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared
      warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared
      warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared
      warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared
      warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared
      warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared
      warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared
      warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared
      warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared
      warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared
      [22/23] Cythonizing /tmp/pip-req-build-0zm7yohx/h5py/h5z.pyx
      warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared
      warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared
      warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared
      warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared
      warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared
      warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared
      warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared
      warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared
      warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared
      warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared
      warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared
      warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared
      warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared
      warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared
      warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared
      warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared
      warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared
      warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared
      warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared
      warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared
      warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared
      warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared
      warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared
      warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared
      warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared
      warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared
      warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared
      warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared
      warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared
      warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared
      warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared
      warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared
      warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared
      warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared
      warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared
      warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared
      warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared
      warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared
      warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared
      warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared
      warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared
      warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared
      warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared
      warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared
      warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared
      warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared
      warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared
      warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared
      warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared
      warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared
      warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared
      [23/23] Cythonizing /tmp/pip-req-build-0zm7yohx/h5py/utils.pyx
      warning: h5py/api_types_hdf5.pxd:418:2: 'H5D_layout_t' redeclared
      warning: h5py/api_types_hdf5.pxd:425:2: 'H5D_alloc_time_t' redeclared
      warning: h5py/api_types_hdf5.pxd:432:2: 'H5D_space_status_t' redeclared
      warning: h5py/api_types_hdf5.pxd:438:2: 'H5D_fill_time_t' redeclared
      warning: h5py/api_types_hdf5.pxd:444:2: 'H5D_fill_value_t' redeclared
      warning: h5py/api_types_hdf5.pxd:456:7: 'H5F_close_degree_t' redeclared
      warning: h5py/api_types_hdf5.pxd:462:2: 'H5FD_mem_t' redeclared
      warning: h5py/api_types_hdf5.pxd:560:2: 'H5T_cset_t' redeclared
      warning: h5py/api_types_hdf5.pxd:739:7: 'H5Z_EDC_t' redeclared
      warning: h5py/api_types_hdf5.pxd:419:4: 'H5D_LAYOUT_ERROR' redeclared
      warning: h5py/api_types_hdf5.pxd:420:4: 'H5D_COMPACT' redeclared
      warning: h5py/api_types_hdf5.pxd:421:4: 'H5D_CONTIGUOUS' redeclared
      warning: h5py/api_types_hdf5.pxd:422:4: 'H5D_CHUNKED' redeclared
      warning: h5py/api_types_hdf5.pxd:423:4: 'H5D_NLAYOUTS' redeclared
      warning: h5py/api_types_hdf5.pxd:426:4: 'H5D_ALLOC_TIME_ERROR' redeclared
      warning: h5py/api_types_hdf5.pxd:427:4: 'H5D_ALLOC_TIME_DEFAULT' redeclared
      warning: h5py/api_types_hdf5.pxd:428:4: 'H5D_ALLOC_TIME_EARLY' redeclared
      warning: h5py/api_types_hdf5.pxd:429:4: 'H5D_ALLOC_TIME_LATE' redeclared
      warning: h5py/api_types_hdf5.pxd:430:4: 'H5D_ALLOC_TIME_INCR' redeclared
      warning: h5py/api_types_hdf5.pxd:433:4: 'H5D_SPACE_STATUS_ERROR' redeclared
      warning: h5py/api_types_hdf5.pxd:434:4: 'H5D_SPACE_STATUS_NOT_ALLOCATED' redeclared
      warning: h5py/api_types_hdf5.pxd:435:4: 'H5D_SPACE_STATUS_PART_ALLOCATED' redeclared
      warning: h5py/api_types_hdf5.pxd:436:4: 'H5D_SPACE_STATUS_ALLOCATED' redeclared
      warning: h5py/api_types_hdf5.pxd:439:4: 'H5D_FILL_TIME_ERROR' redeclared
      warning: h5py/api_types_hdf5.pxd:440:4: 'H5D_FILL_TIME_ALLOC' redeclared
      warning: h5py/api_types_hdf5.pxd:441:4: 'H5D_FILL_TIME_NEVER' redeclared
      warning: h5py/api_types_hdf5.pxd:442:4: 'H5D_FILL_TIME_IFSET' redeclared
      warning: h5py/api_types_hdf5.pxd:445:4: 'H5D_FILL_VALUE_ERROR' redeclared
      warning: h5py/api_types_hdf5.pxd:446:4: 'H5D_FILL_VALUE_UNDEFINED' redeclared
      warning: h5py/api_types_hdf5.pxd:447:4: 'H5D_FILL_VALUE_DEFAULT' redeclared
      warning: h5py/api_types_hdf5.pxd:448:4: 'H5D_FILL_VALUE_USER_DEFINED' redeclared
      warning: h5py/api_types_hdf5.pxd:457:4: 'H5F_CLOSE_WEAK' redeclared
      warning: h5py/api_types_hdf5.pxd:458:4: 'H5F_CLOSE_SEMI' redeclared
      warning: h5py/api_types_hdf5.pxd:459:4: 'H5F_CLOSE_STRONG' redeclared
      warning: h5py/api_types_hdf5.pxd:460:4: 'H5F_CLOSE_DEFAULT' redeclared
      warning: h5py/api_types_hdf5.pxd:463:4: 'H5FD_MEM_NOLIST' redeclared
      warning: h5py/api_types_hdf5.pxd:464:4: 'H5FD_MEM_DEFAULT' redeclared
      warning: h5py/api_types_hdf5.pxd:465:4: 'H5FD_MEM_SUPER' redeclared
      warning: h5py/api_types_hdf5.pxd:466:4: 'H5FD_MEM_BTREE' redeclared
      warning: h5py/api_types_hdf5.pxd:467:4: 'H5FD_MEM_DRAW' redeclared
      warning: h5py/api_types_hdf5.pxd:468:4: 'H5FD_MEM_GHEAP' redeclared
      warning: h5py/api_types_hdf5.pxd:469:4: 'H5FD_MEM_LHEAP' redeclared
      warning: h5py/api_types_hdf5.pxd:470:4: 'H5FD_MEM_OHDR' redeclared
      warning: h5py/api_types_hdf5.pxd:471:4: 'H5FD_MEM_NTYPES' redeclared
      warning: h5py/api_types_hdf5.pxd:561:4: 'H5T_CSET_ERROR' redeclared
      warning: h5py/api_types_hdf5.pxd:562:4: 'H5T_CSET_ASCII' redeclared
      warning: h5py/api_types_hdf5.pxd:705:2: 'H5Z_filter_t' redeclared
      warning: h5py/api_types_hdf5.pxd:740:6: 'H5Z_ERROR_EDC' redeclared
      warning: h5py/api_types_hdf5.pxd:741:6: 'H5Z_DISABLE_EDC' redeclared
      warning: h5py/api_types_hdf5.pxd:742:6: 'H5Z_ENABLE_EDC' redeclared
      warning: h5py/api_types_hdf5.pxd:743:6: 'H5Z_NO_EDC' redeclared
      building 'h5py.defs' extension
      creating build/temp.linux-x86_64-3.9
      creating build/temp.linux-x86_64-3.9/tmp
      creating build/temp.linux-x86_64-3.9/tmp/pip-req-build-0zm7yohx
      creating build/temp.linux-x86_64-3.9/tmp/pip-req-build-0zm7yohx/h5py
      gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -march=x86-64 -mtune=generic -O3 -pipe -fno-plt -fno-semantic-interposition -march=x86-64 -mtune=generic -O3 -pipe -fno-plt -march=x86-64 -mtune=generic -O3 -pipe -fno-plt -fPIC -DH5_USE_16_API -I./h5py -I/tmp/pip-req-build-0zm7yohx/lzf -I/opt/local/include -I/usr/local/include -I/home/ali/.cache/pypoetry/virtualenvs/hsd-cpxpEE6O-py3.9/lib/python3.9/site-packages/numpy/core/include -I/home/ali/.cache/pypoetry/virtualenvs/hsd-cpxpEE6O-py3.9/include -I/usr/include/python3.9 -c /tmp/pip-req-build-0zm7yohx/h5py/defs.c -o build/temp.linux-x86_64-3.9/tmp/pip-req-build-0zm7yohx/h5py/defs.o
      In file included from /home/ali/.cache/pypoetry/virtualenvs/hsd-cpxpEE6O-py3.9/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
                       from /home/ali/.cache/pypoetry/virtualenvs/hsd-cpxpEE6O-py3.9/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
                       from /home/ali/.cache/pypoetry/virtualenvs/hsd-cpxpEE6O-py3.9/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:4,
                       from /tmp/pip-req-build-0zm7yohx/h5py/api_compat.h:26,
                       from /tmp/pip-req-build-0zm7yohx/h5py/defs.c:656:
      /home/ali/.cache/pypoetry/virtualenvs/hsd-cpxpEE6O-py3.9/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
         17 | #warning "Using deprecated NumPy API, disable it with " \
            |  ^~~~~~~
      /tmp/pip-req-build-0zm7yohx/h5py/defs.c: In function ‘__pyx_f_4h5py_4defs_H5Pget_driver_info’:
      /tmp/pip-req-build-0zm7yohx/h5py/defs.c:21770:13: warning: assignment discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers]
      21770 |   __pyx_t_1 = H5Pget_driver_info(__pyx_v_plist_id); if (unlikely(PyErr_Occurred())) __PYX_ERR(0, 2016, __pyx_L1_error)
            |             ^
      In file included from /home/ali/.cache/pypoetry/virtualenvs/hsd-cpxpEE6O-py3.9/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:21,
                       from /home/ali/.cache/pypoetry/virtualenvs/hsd-cpxpEE6O-py3.9/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:4,
                       from /tmp/pip-req-build-0zm7yohx/h5py/api_compat.h:26,
                       from /tmp/pip-req-build-0zm7yohx/h5py/defs.c:656:
      At top level:
      /home/ali/.cache/pypoetry/virtualenvs/hsd-cpxpEE6O-py3.9/lib/python3.9/site-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: ‘_import_array’ defined but not used [-Wunused-function]
       1463 | _import_array(void)
            | ^~~~~~~~~~~~~
      gcc -pthread -shared -Wl,-O1,--sort-common,--as-needed,-z,relro,-z,now -fno-semantic-interposition -Wl,-O1,--sort-common,--as-needed,-z,relro,-z,now build/temp.linux-x86_64-3.9/tmp/pip-req-build-0zm7yohx/h5py/defs.o -L/opt/local/lib -L/usr/local/lib -L/usr/lib -Wl,--enable-new-dtags,-R/opt/local/lib -Wl,--enable-new-dtags,-R/usr/local/lib -lhdf5 -lhdf5_hl -o build/lib.linux-x86_64-3.9/h5py/defs.cpython-39-x86_64-linux-gnu.so
      building 'h5py._errors' extension
      gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -march=x86-64 -mtune=generic -O3 -pipe -fno-plt -fno-semantic-interposition -march=x86-64 -mtune=generic -O3 -pipe -fno-plt -march=x86-64 -mtune=generic -O3 -pipe -fno-plt -fPIC -DH5_USE_16_API -I./h5py -I/tmp/pip-req-build-0zm7yohx/lzf -I/opt/local/include -I/usr/local/include -I/home/ali/.cache/pypoetry/virtualenvs/hsd-cpxpEE6O-py3.9/lib/python3.9/site-packages/numpy/core/include -I/home/ali/.cache/pypoetry/virtualenvs/hsd-cpxpEE6O-py3.9/include -I/usr/include/python3.9 -c /tmp/pip-req-build-0zm7yohx/h5py/_errors.c -o build/temp.linux-x86_64-3.9/tmp/pip-req-build-0zm7yohx/h5py/_errors.o
      In file included from /home/ali/.cache/pypoetry/virtualenvs/hsd-cpxpEE6O-py3.9/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
                       from /home/ali/.cache/pypoetry/virtualenvs/hsd-cpxpEE6O-py3.9/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
                       from /home/ali/.cache/pypoetry/virtualenvs/hsd-cpxpEE6O-py3.9/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:4,
                       from /tmp/pip-req-build-0zm7yohx/h5py/api_compat.h:26,
                       from /tmp/pip-req-build-0zm7yohx/h5py/_errors.c:656:
      /home/ali/.cache/pypoetry/virtualenvs/hsd-cpxpEE6O-py3.9/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
         17 | #warning "Using deprecated NumPy API, disable it with " \
            |  ^~~~~~~
      /tmp/pip-req-build-0zm7yohx/h5py/_errors.c: In function ‘__pyx_f_4h5py_7_errors_walk_cb’:
      /tmp/pip-req-build-0zm7yohx/h5py/_errors.c:1342:13: warning: assignment discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers]
       1342 |   __pyx_t_3 = (__pyx_v_desc[0]).desc;
            |             ^
      /tmp/pip-req-build-0zm7yohx/h5py/_errors.c: In function ‘__pyx_f_4h5py_7_errors_set_exception’:
      /tmp/pip-req-build-0zm7yohx/h5py/_errors.c:1634:13: warning: assignment discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers]
       1634 |   __pyx_t_8 = __pyx_v_err.err.desc;
            |             ^
      /tmp/pip-req-build-0zm7yohx/h5py/_errors.c:1717:13: warning: assignment discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers]
       1717 |   __pyx_t_8 = __pyx_v_err.err.desc;
            |             ^
      In file included from /home/ali/.cache/pypoetry/virtualenvs/hsd-cpxpEE6O-py3.9/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:21,
                       from /home/ali/.cache/pypoetry/virtualenvs/hsd-cpxpEE6O-py3.9/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:4,
                       from /tmp/pip-req-build-0zm7yohx/h5py/api_compat.h:26,
                       from /tmp/pip-req-build-0zm7yohx/h5py/_errors.c:656:
      At top level:
      /home/ali/.cache/pypoetry/virtualenvs/hsd-cpxpEE6O-py3.9/lib/python3.9/site-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: ‘_import_array’ defined but not used [-Wunused-function]
       1463 | _import_array(void)
            | ^~~~~~~~~~~~~
      gcc -pthread -shared -Wl,-O1,--sort-common,--as-needed,-z,relro,-z,now -fno-semantic-interposition -Wl,-O1,--sort-common,--as-needed,-z,relro,-z,now build/temp.linux-x86_64-3.9/tmp/pip-req-build-0zm7yohx/h5py/_errors.o -L/opt/local/lib -L/usr/local/lib -L/usr/lib -Wl,--enable-new-dtags,-R/opt/local/lib -Wl,--enable-new-dtags,-R/usr/local/lib -lhdf5 -lhdf5_hl -o build/lib.linux-x86_64-3.9/h5py/_errors.cpython-39-x86_64-linux-gnu.so
      building 'h5py._objects' extension
      gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -march=x86-64 -mtune=generic -O3 -pipe -fno-plt -fno-semantic-interposition -march=x86-64 -mtune=generic -O3 -pipe -fno-plt -march=x86-64 -mtune=generic -O3 -pipe -fno-plt -fPIC -DH5_USE_16_API -I./h5py -I/tmp/pip-req-build-0zm7yohx/lzf -I/opt/local/include -I/usr/local/include -I/home/ali/.cache/pypoetry/virtualenvs/hsd-cpxpEE6O-py3.9/lib/python3.9/site-packages/numpy/core/include -I/home/ali/.cache/pypoetry/virtualenvs/hsd-cpxpEE6O-py3.9/include -I/usr/include/python3.9 -c /tmp/pip-req-build-0zm7yohx/h5py/_objects.c -o build/temp.linux-x86_64-3.9/tmp/pip-req-build-0zm7yohx/h5py/_objects.o
      In file included from /home/ali/.cache/pypoetry/virtualenvs/hsd-cpxpEE6O-py3.9/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
                       from /home/ali/.cache/pypoetry/virtualenvs/hsd-cpxpEE6O-py3.9/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
                       from /home/ali/.cache/pypoetry/virtualenvs/hsd-cpxpEE6O-py3.9/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:4,
                       from /tmp/pip-req-build-0zm7yohx/h5py/api_compat.h:26,
                       from /tmp/pip-req-build-0zm7yohx/h5py/_objects.c:656:
      /home/ali/.cache/pypoetry/virtualenvs/hsd-cpxpEE6O-py3.9/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
         17 | #warning "Using deprecated NumPy API, disable it with " \
            |  ^~~~~~~
      /tmp/pip-req-build-0zm7yohx/h5py/_objects.c: In function ‘__pyx_pf_4h5py_8_objects_9FastRLock_6release’:
      /tmp/pip-req-build-0zm7yohx/h5py/_objects.c:2613:38: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘long unsigned int’ [-Wsign-compare]
       2613 |   __pyx_t_1 = ((__pyx_v_self->_owner != PyThread_get_thread_ident()) != 0);
            |                                      ^~
      /tmp/pip-req-build-0zm7yohx/h5py/_objects.c: In function ‘__pyx_pf_4h5py_8_objects_9FastRLock_10__exit__’:
      /tmp/pip-req-build-0zm7yohx/h5py/_objects.c:2831:38: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘long unsigned int’ [-Wsign-compare]
       2831 |   __pyx_t_1 = ((__pyx_v_self->_owner != PyThread_get_thread_ident()) != 0);
            |                                      ^~
      /tmp/pip-req-build-0zm7yohx/h5py/_objects.c: In function ‘__pyx_pf_4h5py_8_objects_9FastRLock_12_is_owned’:
      /tmp/pip-req-build-0zm7yohx/h5py/_objects.c:2924:59: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘long unsigned int’ [-Wsign-compare]
       2924 |   __pyx_t_1 = __Pyx_PyBool_FromLong((__pyx_v_self->_owner == PyThread_get_thread_ident())); if (unlikely(!__pyx_t_1)) __PYX_ERR(0, 63, __pyx_L1_error)
            |                                                           ^~
      In file included from /home/ali/.cache/pypoetry/virtualenvs/hsd-cpxpEE6O-py3.9/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:21,
                       from /home/ali/.cache/pypoetry/virtualenvs/hsd-cpxpEE6O-py3.9/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:4,
                       from /tmp/pip-req-build-0zm7yohx/h5py/api_compat.h:26,
                       from /tmp/pip-req-build-0zm7yohx/h5py/_objects.c:656:
      At top level:
      /home/ali/.cache/pypoetry/virtualenvs/hsd-cpxpEE6O-py3.9/lib/python3.9/site-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: ‘_import_array’ defined but not used [-Wunused-function]
       1463 | _import_array(void)
            | ^~~~~~~~~~~~~
      gcc -pthread -shared -Wl,-O1,--sort-common,--as-needed,-z,relro,-z,now -fno-semantic-interposition -Wl,-O1,--sort-common,--as-needed,-z,relro,-z,now build/temp.linux-x86_64-3.9/tmp/pip-req-build-0zm7yohx/h5py/_objects.o -L/opt/local/lib -L/usr/local/lib -L/usr/lib -Wl,--enable-new-dtags,-R/opt/local/lib -Wl,--enable-new-dtags,-R/usr/local/lib -lhdf5 -lhdf5_hl -o build/lib.linux-x86_64-3.9/h5py/_objects.cpython-39-x86_64-linux-gnu.so
      building 'h5py._proxy' extension
      gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -march=x86-64 -mtune=generic -O3 -pipe -fno-plt -fno-semantic-interposition -march=x86-64 -mtune=generic -O3 -pipe -fno-plt -march=x86-64 -mtune=generic -O3 -pipe -fno-plt -fPIC -DH5_USE_16_API -I./h5py -I/tmp/pip-req-build-0zm7yohx/lzf -I/opt/local/include -I/usr/local/include -I/home/ali/.cache/pypoetry/virtualenvs/hsd-cpxpEE6O-py3.9/lib/python3.9/site-packages/numpy/core/include -I/home/ali/.cache/pypoetry/virtualenvs/hsd-cpxpEE6O-py3.9/include -I/usr/include/python3.9 -c /tmp/pip-req-build-0zm7yohx/h5py/_proxy.c -o build/temp.linux-x86_64-3.9/tmp/pip-req-build-0zm7yohx/h5py/_proxy.o
      In file included from /home/ali/.cache/pypoetry/virtualenvs/hsd-cpxpEE6O-py3.9/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
                       from /home/ali/.cache/pypoetry/virtualenvs/hsd-cpxpEE6O-py3.9/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
                       from /home/ali/.cache/pypoetry/virtualenvs/hsd-cpxpEE6O-py3.9/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:4,
                       from /tmp/pip-req-build-0zm7yohx/h5py/api_compat.h:26,
                       from /tmp/pip-req-build-0zm7yohx/h5py/_proxy.c:656:
      /home/ali/.cache/pypoetry/virtualenvs/hsd-cpxpEE6O-py3.9/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
         17 | #warning "Using deprecated NumPy API, disable it with " \
            |  ^~~~~~~
      In file included from /home/ali/.cache/pypoetry/virtualenvs/hsd-cpxpEE6O-py3.9/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:21,
                       from /home/ali/.cache/pypoetry/virtualenvs/hsd-cpxpEE6O-py3.9/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:4,
                       from /tmp/pip-req-build-0zm7yohx/h5py/api_compat.h:26,
                       from /tmp/pip-req-build-0zm7yohx/h5py/_proxy.c:656:
      /home/ali/.cache/pypoetry/virtualenvs/hsd-cpxpEE6O-py3.9/lib/python3.9/site-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: ‘_import_array’ defined but not used [-Wunused-function]
       1463 | _import_array(void)
            | ^~~~~~~~~~~~~
      gcc -pthread -shared -Wl,-O1,--sort-common,--as-needed,-z,relro,-z,now -fno-semantic-interposition -Wl,-O1,--sort-common,--as-needed,-z,relro,-z,now build/temp.linux-x86_64-3.9/tmp/pip-req-build-0zm7yohx/h5py/_proxy.o -L/opt/local/lib -L/usr/local/lib -L/usr/lib -Wl,--enable-new-dtags,-R/opt/local/lib -Wl,--enable-new-dtags,-R/usr/local/lib -lhdf5 -lhdf5_hl -o build/lib.linux-x86_64-3.9/h5py/_proxy.cpython-39-x86_64-linux-gnu.so
      building 'h5py.h5fd' extension
      gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -march=x86-64 -mtune=generic -O3 -pipe -fno-plt -fno-semantic-interposition -march=x86-64 -mtune=generic -O3 -pipe -fno-plt -march=x86-64 -mtune=generic -O3 -pipe -fno-plt -fPIC -DH5_USE_16_API -I./h5py -I/tmp/pip-req-build-0zm7yohx/lzf -I/opt/local/include -I/usr/local/include -I/home/ali/.cache/pypoetry/virtualenvs/hsd-cpxpEE6O-py3.9/lib/python3.9/site-packages/numpy/core/include -I/home/ali/.cache/pypoetry/virtualenvs/hsd-cpxpEE6O-py3.9/include -I/usr/include/python3.9 -c /tmp/pip-req-build-0zm7yohx/h5py/h5fd.c -o build/temp.linux-x86_64-3.9/tmp/pip-req-build-0zm7yohx/h5py/h5fd.o
      In file included from /home/ali/.cache/pypoetry/virtualenvs/hsd-cpxpEE6O-py3.9/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
                       from /home/ali/.cache/pypoetry/virtualenvs/hsd-cpxpEE6O-py3.9/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
                       from /home/ali/.cache/pypoetry/virtualenvs/hsd-cpxpEE6O-py3.9/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:4,
                       from /tmp/pip-req-build-0zm7yohx/h5py/api_compat.h:26,
                       from /tmp/pip-req-build-0zm7yohx/h5py/h5fd.c:656:
      /home/ali/.cache/pypoetry/virtualenvs/hsd-cpxpEE6O-py3.9/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
         17 | #warning "Using deprecated NumPy API, disable it with " \
            |  ^~~~~~~
      /tmp/pip-req-build-0zm7yohx/h5py/h5fd.c: In function ‘__pyx_f_4h5py_4h5fd_H5FD_fileobj_read’:
      /tmp/pip-req-build-0zm7yohx/h5py/h5fd.c:3061:29: warning: comparison of integer expressions of different signedness: ‘Py_ssize_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
       3061 |     __pyx_t_6 = ((__pyx_t_9 == __pyx_v_size) != 0);
            |                             ^~
      In file included from /home/ali/.cache/pypoetry/virtualenvs/hsd-cpxpEE6O-py3.9/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:21,
                       from /home/ali/.cache/pypoetry/virtualenvs/hsd-cpxpEE6O-py3.9/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:4,
                       from /tmp/pip-req-build-0zm7yohx/h5py/api_compat.h:26,
                       from /tmp/pip-req-build-0zm7yohx/h5py/h5fd.c:656:
      At top level:
      /home/ali/.cache/pypoetry/virtualenvs/hsd-cpxpEE6O-py3.9/lib/python3.9/site-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: ‘_import_array’ defined but not used [-Wunused-function]
       1463 | _import_array(void)
            | ^~~~~~~~~~~~~
      gcc -pthread -shared -Wl,-O1,--sort-common,--as-needed,-z,relro,-z,now -fno-semantic-interposition -Wl,-O1,--sort-common,--as-needed,-z,relro,-z,now build/temp.linux-x86_64-3.9/tmp/pip-req-build-0zm7yohx/h5py/h5fd.o -L/opt/local/lib -L/usr/local/lib -L/usr/lib -Wl,--enable-new-dtags,-R/opt/local/lib -Wl,--enable-new-dtags,-R/usr/local/lib -lhdf5 -lhdf5_hl -o build/lib.linux-x86_64-3.9/h5py/h5fd.cpython-39-x86_64-linux-gnu.so
      building 'h5py.h5z' extension
      creating build/temp.linux-x86_64-3.9/tmp/pip-req-build-0zm7yohx/lzf
      creating build/temp.linux-x86_64-3.9/tmp/pip-req-build-0zm7yohx/lzf/lzf
      gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -march=x86-64 -mtune=generic -O3 -pipe -fno-plt -fno-semantic-interposition -march=x86-64 -mtune=generic -O3 -pipe -fno-plt -march=x86-64 -mtune=generic -O3 -pipe -fno-plt -fPIC -DH5_USE_16_API -I./h5py -I/tmp/pip-req-build-0zm7yohx/lzf -I/opt/local/include -I/usr/local/include -I/home/ali/.cache/pypoetry/virtualenvs/hsd-cpxpEE6O-py3.9/lib/python3.9/site-packages/numpy/core/include -I/home/ali/.cache/pypoetry/virtualenvs/hsd-cpxpEE6O-py3.9/include -I/usr/include/python3.9 -c /tmp/pip-req-build-0zm7yohx/h5py/h5z.c -o build/temp.linux-x86_64-3.9/tmp/pip-req-build-0zm7yohx/h5py/h5z.o
      In file included from /home/ali/.cache/pypoetry/virtualenvs/hsd-cpxpEE6O-py3.9/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
                       from /home/ali/.cache/pypoetry/virtualenvs/hsd-cpxpEE6O-py3.9/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
                       from /home/ali/.cache/pypoetry/virtualenvs/hsd-cpxpEE6O-py3.9/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:4,
                       from /tmp/pip-req-build-0zm7yohx/h5py/api_compat.h:26,
                       from /tmp/pip-req-build-0zm7yohx/h5py/h5z.c:659:
      /home/ali/.cache/pypoetry/virtualenvs/hsd-cpxpEE6O-py3.9/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
         17 | #warning "Using deprecated NumPy API, disable it with " \
            |  ^~~~~~~
      In file included from /home/ali/.cache/pypoetry/virtualenvs/hsd-cpxpEE6O-py3.9/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:21,
                       from /home/ali/.cache/pypoetry/virtualenvs/hsd-cpxpEE6O-py3.9/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:4,
                       from /tmp/pip-req-build-0zm7yohx/h5py/api_compat.h:26,
                       from /tmp/pip-req-build-0zm7yohx/h5py/h5z.c:659:
      /home/ali/.cache/pypoetry/virtualenvs/hsd-cpxpEE6O-py3.9/lib/python3.9/site-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: ‘_import_array’ defined but not used [-Wunused-function]
       1463 | _import_array(void)
            | ^~~~~~~~~~~~~
      gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -march=x86-64 -mtune=generic -O3 -pipe -fno-plt -fno-semantic-interposition -march=x86-64 -mtune=generic -O3 -pipe -fno-plt -march=x86-64 -mtune=generic -O3 -pipe -fno-plt -fPIC -DH5_USE_16_API -I./h5py -I/tmp/pip-req-build-0zm7yohx/lzf -I/opt/local/include -I/usr/local/include -I/home/ali/.cache/pypoetry/virtualenvs/hsd-cpxpEE6O-py3.9/lib/python3.9/site-packages/numpy/core/include -I/home/ali/.cache/pypoetry/virtualenvs/hsd-cpxpEE6O-py3.9/include -I/usr/include/python3.9 -c /tmp/pip-req-build-0zm7yohx/lzf/lzf/lzf_c.c -o build/temp.linux-x86_64-3.9/tmp/pip-req-build-0zm7yohx/lzf/lzf/lzf_c.o
      gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -march=x86-64 -mtune=generic -O3 -pipe -fno-plt -fno-semantic-interposition -march=x86-64 -mtune=generic -O3 -pipe -fno-plt -march=x86-64 -mtune=generic -O3 -pipe -fno-plt -fPIC -DH5_USE_16_API -I./h5py -I/tmp/pip-req-build-0zm7yohx/lzf -I/opt/local/include -I/usr/local/include -I/home/ali/.cache/pypoetry/virtualenvs/hsd-cpxpEE6O-py3.9/lib/python3.9/site-packages/numpy/core/include -I/home/ali/.cache/pypoetry/virtualenvs/hsd-cpxpEE6O-py3.9/include -I/usr/include/python3.9 -c /tmp/pip-req-build-0zm7yohx/lzf/lzf/lzf_d.c -o build/temp.linux-x86_64-3.9/tmp/pip-req-build-0zm7yohx/lzf/lzf/lzf_d.o
      gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -march=x86-64 -mtune=generic -O3 -pipe -fno-plt -fno-semantic-interposition -march=x86-64 -mtune=generic -O3 -pipe -fno-plt -march=x86-64 -mtune=generic -O3 -pipe -fno-plt -fPIC -DH5_USE_16_API -I./h5py -I/tmp/pip-req-build-0zm7yohx/lzf -I/opt/local/include -I/usr/local/include -I/home/ali/.cache/pypoetry/virtualenvs/hsd-cpxpEE6O-py3.9/lib/python3.9/site-packages/numpy/core/include -I/home/ali/.cache/pypoetry/virtualenvs/hsd-cpxpEE6O-py3.9/include -I/usr/include/python3.9 -c /tmp/pip-req-build-0zm7yohx/lzf/lzf_filter.c -o build/temp.linux-x86_64-3.9/tmp/pip-req-build-0zm7yohx/lzf/lzf_filter.o
      gcc -pthread -shared -Wl,-O1,--sort-common,--as-needed,-z,relro,-z,now -fno-semantic-interposition -Wl,-O1,--sort-common,--as-needed,-z,relro,-z,now build/temp.linux-x86_64-3.9/tmp/pip-req-build-0zm7yohx/h5py/h5z.o build/temp.linux-x86_64-3.9/tmp/pip-req-build-0zm7yohx/lzf/lzf/lzf_c.o build/temp.linux-x86_64-3.9/tmp/pip-req-build-0zm7yohx/lzf/lzf/lzf_d.o build/temp.linux-x86_64-3.9/tmp/pip-req-build-0zm7yohx/lzf/lzf_filter.o -L/opt/local/lib -L/usr/local/lib -L/usr/lib -Wl,--enable-new-dtags,-R/opt/local/lib -Wl,--enable-new-dtags,-R/usr/local/lib -lhdf5 -lhdf5_hl -o build/lib.linux-x86_64-3.9/h5py/h5z.cpython-39-x86_64-linux-gnu.so
      building 'h5py.h5' extension
      gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -march=x86-64 -mtune=generic -O3 -pipe -fno-plt -fno-semantic-interposition -march=x86-64 -mtune=generic -O3 -pipe -fno-plt -march=x86-64 -mtune=generic -O3 -pipe -fno-plt -fPIC -DH5_USE_16_API -I./h5py -I/tmp/pip-req-build-0zm7yohx/lzf -I/opt/local/include -I/usr/local/include -I/home/ali/.cache/pypoetry/virtualenvs/hsd-cpxpEE6O-py3.9/lib/python3.9/site-packages/numpy/core/include -I/home/ali/.cache/pypoetry/virtualenvs/hsd-cpxpEE6O-py3.9/include -I/usr/include/python3.9 -c /tmp/pip-req-build-0zm7yohx/h5py/h5.c -o build/temp.linux-x86_64-3.9/tmp/pip-req-build-0zm7yohx/h5py/h5.o
      In file included from /home/ali/.cache/pypoetry/virtualenvs/hsd-cpxpEE6O-py3.9/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
                       from /home/ali/.cache/pypoetry/virtualenvs/hsd-cpxpEE6O-py3.9/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
                       from /home/ali/.cache/pypoetry/virtualenvs/hsd-cpxpEE6O-py3.9/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:4,
                       from /tmp/pip-req-build-0zm7yohx/h5py/api_compat.h:26,
                       from /tmp/pip-req-build-0zm7yohx/h5py/h5.c:656:
      /home/ali/.cache/pypoetry/virtualenvs/hsd-cpxpEE6O-py3.9/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
         17 | #warning "Using deprecated NumPy API, disable it with " \
            |  ^~~~~~~
      In file included from /home/ali/.cache/pypoetry/virtualenvs/hsd-cpxpEE6O-py3.9/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:21,
                       from /home/ali/.cache/pypoetry/virtualenvs/hsd-cpxpEE6O-py3.9/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:4,
                       from /tmp/pip-req-build-0zm7yohx/h5py/api_compat.h:26,
                       from /tmp/pip-req-build-0zm7yohx/h5py/h5.c:656:
      /home/ali/.cache/pypoetry/virtualenvs/hsd-cpxpEE6O-py3.9/lib/python3.9/site-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: ‘_import_array’ defined but not used [-Wunused-function]
       1463 | _import_array(void)
            | ^~~~~~~~~~~~~
      gcc -pthread -shared -Wl,-O1,--sort-common,--as-needed,-z,relro,-z,now -fno-semantic-interposition -Wl,-O1,--sort-common,--as-needed,-z,relro,-z,now build/temp.linux-x86_64-3.9/tmp/pip-req-build-0zm7yohx/h5py/h5.o -L/opt/local/lib -L/usr/local/lib -L/usr/lib -Wl,--enable-new-dtags,-R/opt/local/lib -Wl,--enable-new-dtags,-R/usr/local/lib -lhdf5 -lhdf5_hl -o build/lib.linux-x86_64-3.9/h5py/h5.cpython-39-x86_64-linux-gnu.so
      building 'h5py.h5i' extension
      gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -march=x86-64 -mtune=generic -O3 -pipe -fno-plt -fno-semantic-interposition -march=x86-64 -mtune=generic -O3 -pipe -fno-plt -march=x86-64 -mtune=generic -O3 -pipe -fno-plt -fPIC -DH5_USE_16_API -I./h5py -I/tmp/pip-req-build-0zm7yohx/lzf -I/opt/local/include -I/usr/local/include -I/home/ali/.cache/pypoetry/virtualenvs/hsd-cpxpEE6O-py3.9/lib/python3.9/site-packages/numpy/core/include -I/home/ali/.cache/pypoetry/virtualenvs/hsd-cpxpEE6O-py3.9/include -I/usr/include/python3.9 -c /tmp/pip-req-build-0zm7yohx/h5py/h5i.c -o build/temp.linux-x86_64-3.9/tmp/pip-req-build-0zm7yohx/h5py/h5i.o
      In file included from /home/ali/.cache/pypoetry/virtualenvs/hsd-cpxpEE6O-py3.9/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
                       from /home/ali/.cache/pypoetry/virtualenvs/hsd-cpxpEE6O-py3.9/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
                       from /home/ali/.cache/pypoetry/virtualenvs/hsd-cpxpEE6O-py3.9/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:4,
                       from /tmp/pip-req-build-0zm7yohx/h5py/api_compat.h:26,
                       from /tmp/pip-req-build-0zm7yohx/h5py/h5i.c:656:
      /home/ali/.cache/pypoetry/virtualenvs/hsd-cpxpEE6O-py3.9/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
         17 | #warning "Using deprecated NumPy API, disable it with " \
            |  ^~~~~~~
      /tmp/pip-req-build-0zm7yohx/h5py/h5i.c: In function ‘__pyx_pymod_exec_h5i’:
      /tmp/pip-req-build-0zm7yohx/h5py/h5i.c:3190:43: error: ‘H5I_REFERENCE’ undeclared (first use in this function); did you mean ‘H5T_REFERENCE’?
       3190 |   __pyx_t_2 = __Pyx_PyInt_From_H5I_type_t(H5I_REFERENCE); if (unlikely(!__pyx_t_2)) __PYX_ERR(0, 25, __pyx_L1_error)
            |                                           ^~~~~~~~~~~~~
            |                                           H5T_REFERENCE
      /tmp/pip-req-build-0zm7yohx/h5py/h5i.c:3190:43: note: each undeclared identifier is reported only once for each function it appears in
      In file included from /home/ali/.cache/pypoetry/virtualenvs/hsd-cpxpEE6O-py3.9/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:21,
                       from /home/ali/.cache/pypoetry/virtualenvs/hsd-cpxpEE6O-py3.9/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:4,
                       from /tmp/pip-req-build-0zm7yohx/h5py/api_compat.h:26,
                       from /tmp/pip-req-build-0zm7yohx/h5py/h5i.c:656:
      At top level:
      /home/ali/.cache/pypoetry/virtualenvs/hsd-cpxpEE6O-py3.9/lib/python3.9/site-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: ‘_import_array’ defined but not used [-Wunused-function]
       1463 | _import_array(void)
            | ^~~~~~~~~~~~~
      error: command '/usr/lib/ccache/bin/gcc' failed with exit code 1
      ----------------------------------------
  ERROR: Command errored out with exit status 1: /home/ali/.cache/pypoetry/virtualenvs/hsd-cpxpEE6O-py3.9/bin/python -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-req-build-0zm7yohx/setup.py'"'"'; __file__='"'"'/tmp/pip-req-build-0zm7yohx/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' install --record /tmp/pip-record-x96kivyl/install-record.txt --single-version-externally-managed --compile --install-headers /home/ali/.cache/pypoetry/virtualenvs/hsd-cpxpEE6O-py3.9/include/site/python3.9/h5py Check the logs for full command output.
  WARNING: You are using pip version 21.0.1; however, version 21.1.1 is available.
  You should consider upgrading via the '/home/ali/.cache/pypoetry/virtualenvs/hsd-cpxpEE6O-py3
.9/bin/python -m pip install --upgrade pip' command.
  

  at /usr/lib/python3.9/site-packages/poetry/utils/env.py:1075 in _run
      1071│                 output = subprocess.check_output(
      1072│                     cmd, stderr=subprocess.STDOUT, **kwargs
      1073│                 )
      1074│         except CalledProcessError as e:
    → 1075│             raise EnvCommandError(e, input=input_)
      1076│ 
      1077│         return decode(output)
      1078│ 
      1079│     def execute(self, bin, *args, **kwargs):
1reaction
eborischcommented, Mar 6, 2020

Not sure this should be closed; this is (IMHO) a valid issue to be tracked for h5py: 1.12.0 compatibility. If it makes more sense to open a new issue I certainly can…

I run into the same/similar errors compiling on MacOS 10.13.6 and Python 3.8.2:

h5py/defs.c:16062:56: error: too few arguments to function call, expected 3, have 2
  __pyx_t_1 = H5Oget_info(__pyx_v_loc_id, __pyx_v_oinfo); if (unlikely(PyErr_Occurred())) __PYX_ERR(0, 1509, __pyx_L1_error)
[...]
h5py/defs.c:16174:95: error: too few arguments to function call, expected 5, have 4
  __pyx_t_1 = H5Oget_info_by_name(__pyx_v_loc_id, __pyx_v_name, __pyx_v_oinfo, __pyx_v_lapl_id); if (unlikely(PyErr_Occurred())) __PYX_ERR(0, 1520, __pyx_L1_error)
[...]
h5py/defs.c:16286:144: error: too few arguments to function call, expected 8, have 7
  __pyx_t_1 = H5Oget_info_by_idx(__pyx_v_loc_id, __pyx_v_group_name, __pyx_v_idx_type, __pyx_v_order, __pyx_v_n, __pyx_v_oinfo, __pyx_v_lapl_id); if (unlikely(PyErr_Occurred())) __PYX_ERR(0, 1531, __pyx_L1_error)
[...]
h5py/defs.c:17294:100: error: too few arguments to function call, expected 6, have 5
  __pyx_t_1 = H5Ovisit(__pyx_v_obj_id, __pyx_v_idx_type, __pyx_v_order, __pyx_v_op, __pyx_v_op_data); if (unlikely(PyErr_Occurred())) __PYX_ERR(0, 1630, __pyx_L1_error)
[...]
h5py/defs.c:17406:143: error: too few arguments to function call, expected 8, have 7
  __pyx_t_1 = H5Ovisit_by_name(__pyx_v_loc_id, __pyx_v_obj_name, __pyx_v_idx_type, __pyx_v_order, __pyx_v_op, __pyx_v_op_data, __pyx_v_lapl_id); if (unlikely(PyErr_Occurred())) __PYX_ERR(0, 1641, __pyx_L1_error)
[...]
h5py/defs.c:33641:68: error: too few arguments to function call, expected 4, have 3
  __pyx_t_1 = H5Sencode(__pyx_v_obj_id, __pyx_v_buf, __pyx_v_nalloc); if (unlikely(PyErr_Occurred())) __PYX_ERR(0, 3303, __pyx_L1_error)
[...]
h5py/h5i.c:3114:43: error: use of undeclared identifier 'H5I_REFERENCE'; did you mean 'H5T_REFERENCE'?
  __pyx_t_2 = __Pyx_PyInt_From_H5I_type_t(H5I_REFERENCE); if (unlikely(!__pyx_t_2)) __PYX_ERR(0, 25, __pyx_L1_error)
[...]
h5py/_conv.c:4244:17: error: passing 'hdset_reg_ref_t' to parameter of incompatible type 'const void *'
  (void)(memcpy(__pyx_v_ref->__pyx_base.ref.reg_ref, __pyx_v_buf_ref, (sizeof(hdset_reg_ref_t))));
[...]
h5py/_conv.c:4450:36: error: passing 'hdset_reg_ref_t' to parameter of incompatible type 'const void *'
    (void)(memcpy(__pyx_v_buf_ref, __pyx_v_ref->__pyx_base.ref.reg_ref, (sizeof(hdset_reg_ref_t))));
[...]
h5py/h5l.c:2107:69: error: no member named 'address' in 'union H5L_info2_t::(anonymous at /opt/local/include/H5Lpublic.h:81:5)'
    __pyx_t_2 = __Pyx_PyInt_From_haddr_t(__pyx_v_self->infostruct.u.address); if (unlikely(!__pyx_t_2)) __PYX_ERR(1, 53, __pyx_L1_error)
[...]
# And a number of:
h5py/h5o.c:2111:81: error: no member named 'hdr' in 'struct H5O_info2_t'
  __pyx_t_1 = __Pyx_PyInt_From_unsigned_long((__pyx_v_self->__pyx_base.istr[0]).hdr.mesg.present); if (unlikely(!__pyx_t_1)) __PYX_ERR(1, 49, __pyx_L1_error)
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