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Make chromosome labels configurable

See original GitHub issue

Should be possible to pass in a chromSizes file to configure the chromosome labels track:

This:

          {
            "chromInfoPath": "//s3.amazonaws.com/pkerp/data/hg19/chromSizes.tsv",
            "type": "horizontal-chromosome-labels",
            "position": "top",
            "name": "Chromosome Labels (hg19)",
            "height": 30,
            "uid": "I1QUF22JQJuJ38j9PS4iqw",
            "options": {}
          }

Should become:

          {
            "chromInfoPath": "//s3.amazonaws.com/pkerp/data/hg19/chromSizes.tsv",
            "type": "horizontal-chromosome-labels",
            "position": "top",
            "name": "Chromosome Labels",
            "source": "http://someurl.org/chromSizes.tsv",
            "height": 30,
            "uid": "I1QUF22JQJuJ38j9PS4iqw",
            "options": {}
          }

Issue Analytics

State:
Created 6 years ago
Comments:7 (3 by maintainers)

Top GitHub Comments

1reaction

rdacemelcommented, Jun 26, 2017

Nice web tool, please notify when you have this upgrade ready, it would be awesome!! Thanks.

0reactions

pkerpedjievcommented, Feb 7, 2018

Yeah, that should work. Adding other genomes is a work in progress. If you want, maybe open an issue for the genome you’re interested in and we can continue the conversation there.

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