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Tutorial example hangs indefinitely

See original GitHub issue

I am trying to start the tutorial here:

https://docs.higlass.io/tutorial.html#prerequisites

I downloaded the sample.mcool file you sent me in response to my previously posted issue. I also installed docker and started it up. I then ran the command

% higlass-manage view sample.mcool
loads % higlass-manage view sample.mcool
Pulling latest image...

I don’t get any error message, but it hangs at the step shown above. Any advice on what I might be doing wrong?

I am running macOS 11.6, Docker Desktop 4.11 (69879), python 3.9.5.

Issue Analytics

State:
Created 2 years ago
Comments:11 (5 by maintainers)

Top GitHub Comments

1reaction

wsnoblecommented, Nov 4, 2021

Please don’t worry about this for now. I tried it on a different mac and everything works fine. I suspect that the problem on the other mac has to do with the sample mcool file being corrupted. That mac is at home, so I’ll double check tonight.

0reactions

wsnoblecommented, Nov 5, 2021

Yes, confirmed that the problem was file corruption on my end.

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