setup failed for github action: Command failed: /usr/bin/sudo npm install -g canvas vega vega-cli vega-lite @dvcorg/cml

using the github action failed with this template

• uses: iterative/setup-cml@v1 with: version: latest__

Run iterative/setup-cml@v1 with: version: latest env: pythonLocation: /opt/hostedtoolcache/Python/3.7.9/x64 LD_LIBRARY_PATH: /opt/hostedtoolcache/Python/3.7.9/x64/lib Uninstalling previous CML Installing CML version latest Error: Command failed: /usr/bin/sudo npm install -g canvas vega vega-cli vega-lite @dvcorg/cml npm WARN deprecated tar.gz@1.0.7: ⚠️ WARNING ⚠️ tar.gz module has been deprecated and your application is vulnerable. Please use tar module instead: https://npmjs.com/tar node-pre-gyp WARN Using needle for node-pre-gyp https download node-pre-gyp WARN Pre-built binaries not installable for canvas@2.6.1 and node@14.15.4 (node-v83 ABI, glibc) (falling back to source compile with node-gyp) node-pre-gyp WARN Hit error EACCES: permission denied, mkdir ‘/usr/local/lib/node_modules/canvas/build’ gyp WARN EACCES current user (“nobody”) does not have permission to access the dev dir “/root/.cache/node-gyp/14.15.4” gyp WARN EACCES attempting to reinstall using temporary dev dir “/usr/local/lib/node_modules/canvas/.node-gyp” gyp WARN install got an error, rolling back install gyp WARN install got an error, rolling back install gyp ERR! configure error gyp ERR! stack Error: EACCES: permission denied, mkdir ‘/usr/local/lib/node_modules/canvas/.node-gyp’ gyp ERR! System Linux 5.4.0-1039-azure gyp ERR! command “/usr/local/bin/node” “/usr/local/lib/node_modules/npm/node_modules/node-gyp/bin/node-gyp.js” “configure” “–fallback-to-build” “–module=/usr/local/lib/node_modules/canvas/build/Release/canvas.node” “–module_name=canvas” “–module_path=/usr/local/lib/node_modules/canvas/build/Release” “–napi_version=7” “–node_abi_napi=napi” “–napi_build_version=0” “–node_napi_label=node-v83” gyp ERR! cwd /usr/local/lib/node_modules/canvas gyp ERR! node -v v14.15.4 gyp ERR! node-gyp -v v5.1.0 gyp ERR! not ok node-pre-gyp ERR! build error node-pre-gyp ERR! stack Error: Failed to execute ‘/usr/local/bin/node /usr/local/lib/node_modules/npm/node_modules/node-gyp/bin/node-gyp.js configure --fallback-to-build --module=/usr/local/lib/node_modules/canvas/build/Release/canvas.node --module_name=canvas --module_path=/usr/local/lib/node_modules/canvas/build/Release --napi_version=7 --node_abi_napi=napi --napi_build_version=0 --node_napi_label=node-v83’ (1) node-pre-gyp ERR! stack at ChildProcess.<anonymous> (/usr/local/lib/node_modules/canvas/node_modules/node-pre-gyp/lib/util/compile.js:83:29) node-pre-gyp ERR! stack at ChildProcess.emit (events.js:315:20) node-pre-gyp ERR! stack at maybeClose (internal/child_process.js:1048:16) node-pre-gyp ERR! stack at Process.ChildProcess._handle.onexit (internal/child_process.js:288:5) node-pre-gyp ERR! System Linux 5.4.0-1039-azure node-pre-gyp ERR! command “/usr/local/bin/node” “/usr/local/lib/node_modules/canvas/node_modules/.bin/node-pre-gyp” “install” “–fallback-to-build” node-pre-gyp ERR! cwd /usr/local/lib/node_modules/canvas node-pre-gyp ERR! node -v v14.15.4 node-pre-gyp ERR! node-pre-gyp -v v0.11.0 node-pre-gyp ERR! not ok npm ERR! code ELIFECYCLE npm ERR! errno 1 npm ERR! canvas@2.6.1 install: node-pre-gyp install --fallback-to-build npm ERR! Exit status 1 npm ERR! npm ERR! Failed at the canvas@2.6.1 install script. npm ERR! This is probably not a problem with npm. There is likely additional logging output above.

npm ERR! A complete log of this run can be found in: npm ERR! /root/.npm/_logs/2021-02-05T01_11_39_828Z-debug.log

[DavidGOrtega]

@MeWu-IDM @cliffckerr those intermittent issues is something that sometimes happens due to several factors:

• availability of the packages
• discrepancies in GH runner’s virtual env, I mean, there are sometimes that the runners are running a version with bugs and they are not all aligned. or updated.

For us is very helpful this issue to keep an eye on that. Thanks!

[cliffckerr]

@DavidGOrtega @MeWu-IDM Super weird – just ran the exact same thing that was failing yesterday, and it worked fine! Run results here: https://github.com/InstituteforDiseaseModeling/synthpops/pull/62/checks?check_run_id=1841723229 Think this issue can be closed, sorry about that!