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stim_channel="auto" in read_raw_edf renames stim channel
See original GitHub issueThe new default for mne.io.read_raw_edf in MNE 0.16 will be stim_channel="auto". Using this argument, the stim channel is called Status instead of the usual STI 014. This causes mne.find_events to fail because by default it looks for a channel called STI 014. Is this intended?
Issue Analytics
- State:
- Created 6 years ago
- Comments:23 (23 by maintainers)
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mne.io.read_raw_edf — MNE 1.2.2 documentation
Defaults to 'auto', which means that channels named 'status' or 'trigger' (case ... all channels matching the name(s) are set to STIM.
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test if last channel is detected as STIM by default raw_py = _test_raw_reader(read_raw_edf, input_fname=bdf_path, stim_channel='auto') assert ...
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... in the .bdf EEG files raw = read_raw_edf(dataPath, preload=True, stim_channel='auto', ... Extract data from the first 5 channels, from 1 s to...
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just pushed 0.15.1 https://pypi.python.org/pypi/mne
It sounds like there are now several problematic files. If you have time, making a bulleted list (one per file) at the top of one of these issues that contains file link + existing behavior + what it should do would go a long way to setting up for a proper fix.