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test_io.TestIOSelf failures on Fedora Rawhide i686

See original GitHub issue

Seeing this on Fedora Rawhide i686:

+ mpiexec -np 1 python3 test/runtests.py -v --no-builddir
/builddir/build/BUILD/mpi4py-3.1.1/test/runtests.py:76: DeprecationWarning: The distutils package is deprecated and slated for removal in Python 3.12. Use setuptools or check PEP 632 for potential alternatives
  from distutils.util import get_platform
[0@buildvm-x86-08.iad2.fedoraproject.org] Python 3.10 (/usr/bin/python3)
[0@buildvm-x86-08.iad2.fedoraproject.org] MPI 3.1 (Open MPI 4.1.1)
[0@buildvm-x86-08.iad2.fedoraproject.org] mpi4py 3.1.1 (/builddir/build/BUILDROOT/mpi4py-3.1.1-1.fc36.i386/usr/lib/python3.10/site-packages/openmpi/mpi4py)
--------------------------------------------------------------------------
The OSC pt2pt component does not support MPI_THREAD_MULTIPLE in this release.
Workarounds are to run on a single node, or to use a system with an RDMA
capable network such as Infiniband.
--------------------------------------------------------------------------
...
======================================================================
ERROR: testIReadIWrite (test_io.TestIOSelf)
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/builddir/build/BUILD/mpi4py-3.1.1/test/test_io.py", line 124, in testIReadIWrite
    fh.Set_view(0, etype)
  File "mpi4py/MPI/File.pyx", line 215, in mpi4py.MPI.File.Set_view
mpi4py.MPI.Exception: MPI_ERR_ARG: invalid argument of some other kind
======================================================================
ERROR: testIReadIWriteAll (test_io.TestIOSelf)
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/builddir/build/BUILD/mpi4py-3.1.1/test/test_io.py", line 302, in testIReadIWriteAll
    fh.Set_view(0, etype)
  File "mpi4py/MPI/File.pyx", line 215, in mpi4py.MPI.File.Set_view
mpi4py.MPI.Exception: MPI_ERR_ARG: invalid argument of some other kind
======================================================================
ERROR: testIReadIWriteAt (test_io.TestIOSelf)
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/builddir/build/BUILD/mpi4py-3.1.1/test/test_io.py", line 75, in testIReadIWriteAt
    fh.Set_view(0, etype)
  File "mpi4py/MPI/File.pyx", line 215, in mpi4py.MPI.File.Set_view
mpi4py.MPI.Exception: MPI_ERR_ARG: invalid argument of some other kind
======================================================================
ERROR: testIReadIWriteAtAll (test_io.TestIOSelf)
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/builddir/build/BUILD/mpi4py-3.1.1/test/test_io.py", line 227, in testIReadIWriteAtAll
    fh.Set_view(0, etype)
  File "mpi4py/MPI/File.pyx", line 215, in mpi4py.MPI.File.Set_view
mpi4py.MPI.Exception: MPI_ERR_ARG: invalid argument of some other kind
======================================================================
ERROR: testIReadIWriteShared (test_io.TestIOSelf)
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/builddir/build/BUILD/mpi4py-3.1.1/test/test_io.py", line 176, in testIReadIWriteShared
    fh.Set_view(0, etype)
  File "mpi4py/MPI/File.pyx", line 215, in mpi4py.MPI.File.Set_view
mpi4py.MPI.Exception: MPI_ERR_ARG: invalid argument of some other kind
======================================================================
ERROR: testReadWrite (test_io.TestIOSelf)
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/builddir/build/BUILD/mpi4py-3.1.1/test/test_io.py", line 97, in testReadWrite
    fh.Set_view(0, etype)
  File "mpi4py/MPI/File.pyx", line 215, in mpi4py.MPI.File.Set_view
mpi4py.MPI.Exception: MPI_ERR_ARG: invalid argument of some other kind
======================================================================
ERROR: testReadWriteAll (test_io.TestIOSelf)
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/builddir/build/BUILD/mpi4py-3.1.1/test/test_io.py", line 276, in testReadWriteAll
    fh.Set_view(0, etype)
  File "mpi4py/MPI/File.pyx", line 215, in mpi4py.MPI.File.Set_view
mpi4py.MPI.Exception: MPI_ERR_ARG: invalid argument of some other kind
======================================================================
ERROR: testReadWriteAllBeginEnd (test_io.TestIOSelf)
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/builddir/build/BUILD/mpi4py-3.1.1/test/test_io.py", line 329, in testReadWriteAllBeginEnd
    fh.Set_view(0, etype)
  File "mpi4py/MPI/File.pyx", line 215, in mpi4py.MPI.File.Set_view
mpi4py.MPI.Exception: MPI_ERR_ARG: invalid argument of some other kind
======================================================================
ERROR: testReadWriteAt (test_io.TestIOSelf)
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/builddir/build/BUILD/mpi4py-3.1.1/test/test_io.py", line 53, in testReadWriteAt
    fh.Set_view(0, etype)
  File "mpi4py/MPI/File.pyx", line 215, in mpi4py.MPI.File.Set_view
mpi4py.MPI.Exception: MPI_ERR_ARG: invalid argument of some other kind
======================================================================
ERROR: testReadWriteAtAll (test_io.TestIOSelf)
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/builddir/build/BUILD/mpi4py-3.1.1/test/test_io.py", line 203, in testReadWriteAtAll
    fh.Set_view(0, etype)
  File "mpi4py/MPI/File.pyx", line 215, in mpi4py.MPI.File.Set_view
mpi4py.MPI.Exception: MPI_ERR_ARG: invalid argument of some other kind
======================================================================
ERROR: testReadWriteAtAllBeginEnd (test_io.TestIOSelf)
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/builddir/build/BUILD/mpi4py-3.1.1/test/test_io.py", line 252, in testReadWriteAtAllBeginEnd
    fh.Set_view(0, etype)
  File "mpi4py/MPI/File.pyx", line 215, in mpi4py.MPI.File.Set_view
mpi4py.MPI.Exception: MPI_ERR_ARG: invalid argument of some other kind
======================================================================
ERROR: testReadWriteOrdered (test_io.TestIOSelf)
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/builddir/build/BUILD/mpi4py-3.1.1/test/test_io.py", line 355, in testReadWriteOrdered
    fh.Set_view(0, etype)
  File "mpi4py/MPI/File.pyx", line 215, in mpi4py.MPI.File.Set_view
mpi4py.MPI.Exception: MPI_ERR_ARG: invalid argument of some other kind
======================================================================
ERROR: testReadWriteOrderedBeginEnd (test_io.TestIOSelf)
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/builddir/build/BUILD/mpi4py-3.1.1/test/test_io.py", line 379, in testReadWriteOrderedBeginEnd
    fh.Set_view(0, etype)
  File "mpi4py/MPI/File.pyx", line 215, in mpi4py.MPI.File.Set_view
mpi4py.MPI.Exception: MPI_ERR_ARG: invalid argument of some other kind
======================================================================
ERROR: testReadWriteShared (test_io.TestIOSelf)
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/builddir/build/BUILD/mpi4py-3.1.1/test/test_io.py", line 151, in testReadWriteShared
    fh.Set_view(0, etype)
  File "mpi4py/MPI/File.pyx", line 215, in mpi4py.MPI.File.Set_view
mpi4py.MPI.Exception: MPI_ERR_ARG: invalid argument of some other kind
======================================================================
ERROR: testIReadIWrite (test_io.TestIOWorld)
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/builddir/build/BUILD/mpi4py-3.1.1/test/test_io.py", line 124, in testIReadIWrite
    fh.Set_view(0, etype)
  File "mpi4py/MPI/File.pyx", line 215, in mpi4py.MPI.File.Set_view
mpi4py.MPI.Exception: MPI_ERR_ARG: invalid argument of some other kind
======================================================================
ERROR: testIReadIWriteAll (test_io.TestIOWorld)
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/builddir/build/BUILD/mpi4py-3.1.1/test/test_io.py", line 302, in testIReadIWriteAll
    fh.Set_view(0, etype)
  File "mpi4py/MPI/File.pyx", line 215, in mpi4py.MPI.File.Set_view
mpi4py.MPI.Exception: MPI_ERR_ARG: invalid argument of some other kind
======================================================================
ERROR: testIReadIWriteAt (test_io.TestIOWorld)
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/builddir/build/BUILD/mpi4py-3.1.1/test/test_io.py", line 75, in testIReadIWriteAt
    fh.Set_view(0, etype)
  File "mpi4py/MPI/File.pyx", line 215, in mpi4py.MPI.File.Set_view
mpi4py.MPI.Exception: MPI_ERR_ARG: invalid argument of some other kind
======================================================================
ERROR: testIReadIWriteAtAll (test_io.TestIOWorld)
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/builddir/build/BUILD/mpi4py-3.1.1/test/test_io.py", line 227, in testIReadIWriteAtAll
    fh.Set_view(0, etype)
  File "mpi4py/MPI/File.pyx", line 215, in mpi4py.MPI.File.Set_view
mpi4py.MPI.Exception: MPI_ERR_ARG: invalid argument of some other kind
======================================================================
ERROR: testIReadIWriteShared (test_io.TestIOWorld)
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/builddir/build/BUILD/mpi4py-3.1.1/test/test_io.py", line 176, in testIReadIWriteShared
    fh.Set_view(0, etype)
  File "mpi4py/MPI/File.pyx", line 215, in mpi4py.MPI.File.Set_view
mpi4py.MPI.Exception: MPI_ERR_ARG: invalid argument of some other kind
======================================================================
ERROR: testReadWrite (test_io.TestIOWorld)
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/builddir/build/BUILD/mpi4py-3.1.1/test/test_io.py", line 97, in testReadWrite
    fh.Set_view(0, etype)
  File "mpi4py/MPI/File.pyx", line 215, in mpi4py.MPI.File.Set_view
mpi4py.MPI.Exception: MPI_ERR_ARG: invalid argument of some other kind
======================================================================
ERROR: testReadWriteAll (test_io.TestIOWorld)
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/builddir/build/BUILD/mpi4py-3.1.1/test/test_io.py", line 276, in testReadWriteAll
    fh.Set_view(0, etype)
  File "mpi4py/MPI/File.pyx", line 215, in mpi4py.MPI.File.Set_view
mpi4py.MPI.Exception: MPI_ERR_ARG: invalid argument of some other kind
======================================================================
ERROR: testReadWriteAllBeginEnd (test_io.TestIOWorld)
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/builddir/build/BUILD/mpi4py-3.1.1/test/test_io.py", line 329, in testReadWriteAllBeginEnd
    fh.Set_view(0, etype)
  File "mpi4py/MPI/File.pyx", line 215, in mpi4py.MPI.File.Set_view
mpi4py.MPI.Exception: MPI_ERR_ARG: invalid argument of some other kind
======================================================================
ERROR: testReadWriteAt (test_io.TestIOWorld)
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/builddir/build/BUILD/mpi4py-3.1.1/test/test_io.py", line 53, in testReadWriteAt
    fh.Set_view(0, etype)
  File "mpi4py/MPI/File.pyx", line 215, in mpi4py.MPI.File.Set_view
mpi4py.MPI.Exception: MPI_ERR_ARG: invalid argument of some other kind
======================================================================
ERROR: testReadWriteAtAll (test_io.TestIOWorld)
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/builddir/build/BUILD/mpi4py-3.1.1/test/test_io.py", line 203, in testReadWriteAtAll
    fh.Set_view(0, etype)
  File "mpi4py/MPI/File.pyx", line 215, in mpi4py.MPI.File.Set_view
mpi4py.MPI.Exception: MPI_ERR_ARG: invalid argument of some other kind
======================================================================
ERROR: testReadWriteAtAllBeginEnd (test_io.TestIOWorld)
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/builddir/build/BUILD/mpi4py-3.1.1/test/test_io.py", line 252, in testReadWriteAtAllBeginEnd
    fh.Set_view(0, etype)
  File "mpi4py/MPI/File.pyx", line 215, in mpi4py.MPI.File.Set_view
mpi4py.MPI.Exception: MPI_ERR_ARG: invalid argument of some other kind
======================================================================
ERROR: testReadWriteOrdered (test_io.TestIOWorld)
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/builddir/build/BUILD/mpi4py-3.1.1/test/test_io.py", line 355, in testReadWriteOrdered
    fh.Set_view(0, etype)
  File "mpi4py/MPI/File.pyx", line 215, in mpi4py.MPI.File.Set_view
mpi4py.MPI.Exception: MPI_ERR_ARG: invalid argument of some other kind
======================================================================
ERROR: testReadWriteOrderedBeginEnd (test_io.TestIOWorld)
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/builddir/build/BUILD/mpi4py-3.1.1/test/test_io.py", line 379, in testReadWriteOrderedBeginEnd
    fh.Set_view(0, etype)
  File "mpi4py/MPI/File.pyx", line 215, in mpi4py.MPI.File.Set_view
mpi4py.MPI.Exception: MPI_ERR_ARG: invalid argument of some other kind
======================================================================
ERROR: testReadWriteShared (test_io.TestIOWorld)
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/builddir/build/BUILD/mpi4py-3.1.1/test/test_io.py", line 151, in testReadWriteShared
    fh.Set_view(0, etype)
  File "mpi4py/MPI/File.pyx", line 215, in mpi4py.MPI.File.Set_view
mpi4py.MPI.Exception: MPI_ERR_ARG: invalid argument of some other kind
======================================================================
FAIL: testStruct4 (test_util_dtlib.TestUtilDTLib) (typecode='q')
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/builddir/build/BUILD/mpi4py-3.1.1/test/test_util_dtlib.py", line 165, in testStruct4
    self.assertEqual(mt.extent, n*ex1)
AssertionError: 20 != 24
======================================================================
FAIL: testStruct4 (test_util_dtlib.TestUtilDTLib) (typecode='Q')
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/builddir/build/BUILD/mpi4py-3.1.1/test/test_util_dtlib.py", line 165, in testStruct4
    self.assertEqual(mt.extent, n*ex1)
AssertionError: 20 != 24
======================================================================
FAIL: testStruct4 (test_util_dtlib.TestUtilDTLib) (typecode='d')
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/builddir/build/BUILD/mpi4py-3.1.1/test/test_util_dtlib.py", line 165, in testStruct4
    self.assertEqual(mt.extent, n*ex1)
AssertionError: 20 != 24
======================================================================
FAIL: testStruct4 (test_util_dtlib.TestUtilDTLib) (typecode='g')
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/builddir/build/BUILD/mpi4py-3.1.1/test/test_util_dtlib.py", line 165, in testStruct4
    self.assertEqual(mt.extent, n*ex1)
AssertionError: 28 != 36
======================================================================
FAIL: testStruct4 (test_util_dtlib.TestUtilDTLib) (typecode='D')
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/builddir/build/BUILD/mpi4py-3.1.1/test/test_util_dtlib.py", line 165, in testStruct4
    self.assertEqual(mt.extent, n*ex1)
AssertionError: 36 != 40
======================================================================
FAIL: testStruct4 (test_util_dtlib.TestUtilDTLib) (typecode='G')
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/builddir/build/BUILD/mpi4py-3.1.1/test/test_util_dtlib.py", line 165, in testStruct4
    self.assertEqual(mt.extent, n*ex1)
AssertionError: 52 != 60
======================================================================
FAIL: testStruct4 (test_util_dtlib.TestUtilDTLib) (typecode='i8')
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/builddir/build/BUILD/mpi4py-3.1.1/test/test_util_dtlib.py", line 165, in testStruct4
    self.assertEqual(mt.extent, n*ex1)
AssertionError: 20 != 24
======================================================================
FAIL: testStruct4 (test_util_dtlib.TestUtilDTLib) (typecode='u8')
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/builddir/build/BUILD/mpi4py-3.1.1/test/test_util_dtlib.py", line 165, in testStruct4
    self.assertEqual(mt.extent, n*ex1)
AssertionError: 20 != 24
======================================================================
FAIL: testStruct4 (test_util_dtlib.TestUtilDTLib) (typecode='f8')
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/builddir/build/BUILD/mpi4py-3.1.1/test/test_util_dtlib.py", line 165, in testStruct4
    self.assertEqual(mt.extent, n*ex1)
AssertionError: 20 != 24
----------------------------------------------------------------------
Ran 1385 tests in 41.098s
FAILED (failures=9, errors=28, skipped=191)

Issue Analytics

  • State:closed
  • Created 2 years ago
  • Comments:31 (29 by maintainers)

github_iconTop GitHub Comments

1reaction
drew-parsonscommented, Apr 17, 2022
1reaction
drew-parsonscommented, Apr 17, 2022

I’ve applied patch https://github.com/mpi4py/mpi4py/commit/2d868d7794c930fc524cfe603eedd1cc4f46b56b to the debian mpi4py package 3.1.3-2. It allows i386 to pass CI tests (by skipping the test_io long double test with openmpi).

Read more comments on GitHub >

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