Add AutoAdjustChannel transform
See original GitHub issueIs your feature request related to a problem? Please describe.
Now we have AddChannel
and AsChannelFirst
transforms, need users to manually select expected transform to convert their data to be “channel-first”. Several internal researchers got confused by the wrong transform, especially when their image
and label
have different shapes(maybe image
is 3 channels data and channel last, label
is single channel data and doesn’t have channel dim).
Actually, we can automatically adjust channel dim for most cases based on the spatial_size
from meta_data. If advanced users really want to do some special logic, they can use AddChannel
and AsChannelFirst
directly.
Issue Analytics
- State:
- Created 3 years ago
- Comments:5 (5 by maintainers)
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Top GitHub Comments
Perfect, thanks!
Hi @rijobro ,
Yes, because all the data in MONAI should be
channel_first
and you can get theoriginal_channel_dim
from meta dict. Then I think you can restore the original channel dim or remove channel dim, right?Thanks.