Cannot download app on Windows
See original GitHub issueDescribe the bug os: windows 10
After installing monailabel on my windows machine, I tried to follow the tutorial. The step to download app radiology
failed with error
App ... not exist
It seems like instead of downloading the app, it tries to load/locate the app locally?
To Reproduce Steps to reproduce the behavior:
- Install monailabel on a windows 10 machine:
pip install monailabel
- Run command
monailabel apps --download --name radiology --output apps
Expected behavior The app should be downloaded.
Screenshots Ended with error. See above for screenshot.
Environment
================================
Printing MONAI config...
================================
MONAI version: 0.8.1
Numpy version: 1.21.6
Pytorch version: 1.9.0+cu111
MONAI flags: HAS_EXT = False, USE_COMPILED = False
MONAI rev id: 71ff399a3ea07aef667b23653620a290364095b1
Optional dependencies:
Pytorch Ignite version: 0.4.8
Nibabel version: 3.2.2
scikit-image version: 0.19.2
Pillow version: 9.1.0
Tensorboard version: 2.8.0
gdown version: 4.4.0
TorchVision version: 0.10.0+cu111
tqdm version: 4.64.0
lmdb version: 1.3.0
psutil version: 5.9.0
pandas version: NOT INSTALLED or UNKNOWN VERSION.
einops version: NOT INSTALLED or UNKNOWN VERSION.
transformers version: NOT INSTALLED or UNKNOWN VERSION.
mlflow version: NOT INSTALLED or UNKNOWN VERSION.
For details about installing the optional dependencies, please visit:
https://docs.monai.io/en/latest/installation.html#installing-the-recommended-dependencies
================================
Printing system config...
================================
System: Windows
Win32 version: ('10', '10.0.19041', 'SP0', 'Multiprocessor Free')
Platform: Windows-10-10.0.19041-SP0
Processor: Intel64 Family 6 Model 165 Stepping 2, GenuineIntel
Machine: AMD64
Python version: 3.7.13
Process name: python.exe
Command: ['python', '-c', 'import monai; monai.config.print_debug_info()']
Open files: [popenfile(path='C:\\WINDOWS\\System32\\en-US\\KernelBase.dll.mui', fd=-1), popenfile(path='C:\\WINDOWS\\System32\\en-US\\kernel32.dll.mui', fd=-1), popenfile(path='C:\\Users\\user\\.anaconda\\navigator\\scripts\\anaconda-navigator-app-out-1.txt', fd=-1), popenfile(path='C:\\Users\\user\\.anaconda\\navigator\\scripts\\anaconda-navigator-app-err-1.txt', fd=-1)]
Num physical CPUs: 6
Num logical CPUs: 12
Num usable CPUs: 12
CPU usage (%): [15.7, 10.1, 5.6, 16.9, 34.8, 12.4, 9.0, 0.0, 6.7, 4.5, 0.0, 73.0]
CPU freq. (MHz): 2592
Load avg. in last 1, 5, 15 mins (%): [0.0, 0.0, 0.0]
Disk usage (%): 68.3
Avg. sensor temp. (Celsius): UNKNOWN for given OS
Total physical memory (GB): 15.8
Available memory (GB): 7.8
Used memory (GB): 8.0
================================
Printing GPU config...
================================
Num GPUs: 1
Has CUDA: True
CUDA version: 11.1
cuDNN enabled: True
cuDNN version: 8005
Current device: 0
Library compiled for CUDA architectures: ['sm_37', 'sm_50', 'sm_60', 'sm_61', 'sm_70', 'sm_75', 'sm_80', 'sm_86', 'compute_37']
GPU 0 Name: NVIDIA GeForce RTX 2070 Super
GPU 0 Is integrated: False
GPU 0 Is multi GPU board: False
GPU 0 Multi processor count: 40
GPU 0 Total memory (GB): 8.0
GPU 0 CUDA capability (maj.min): 7.5
Additional context
Issue Analytics
- State:
- Created a year ago
- Comments:10 (4 by maintainers)
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Top GitHub Comments
pip install monailabel
will currently get version 0.3.2 which is the latest regular release (https://pypi.org/project/monailabel/0.3.2/#history). It appears runningmonailabel apps --download --name radiology --output apps
is specific to the latest development release which would requirepip install monailabel>=0.4*
. Otherwise if you are using version 0.3.2, you need to follow instructions at https://github.com/Project-MONAI/MONAILabel#current-release-03x which does not have a radiology app option.Yes, we have run into the same issue with Slicer’s documentation. Readthedocs is very rigid in its versioning scheme. They tried to make it more flexible (allow manually specified aliases, etc.) but after many failed attempts over several years they gave up on it. I guess there are just too many projects and it is a free service, so they must keep things simple.