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Noisy warning raised by the collate function

See original GitHub issue

🐛 Describe the bug

After upgrading to PyTorch 1.12, I got the following warnings while collating data:

/opt/conda/lib/python3.8/site-packages/torch_geometric/data/collate.py:150: UserWarning: A
n output with one or more elements was resized since it had shape [58791], which does not 
match the required output shape [19597, 3]. This behavior is deprecated, and in a future P
yTorch release outputs will not be resized unless they have zero elements. You can explici
tly reuse an out tensor t by resizing it, inplace, to zero elements with t.resize_(0). (Tr
iggered internally at  ../aten/src/ATen/native/Resize.cpp:17.)                            
  value = torch.cat(values, dim=cat_dim or 0, out=out)

I guess the cause is the same as this one https://github.com/pytorch/pytorch/issues/71063 for PyTorch. Their fix is directly applicable to PyG.

Environment

PyG version: 2.0.4
PyTorch version: 1.12.0
OS: Ubuntu
Python version: 3.8.10
CUDA/cuDNN version: 11.3
How you installed PyTorch and PyG (conda, pip, source): pip
Any other relevant information (e.g., version of torch-scatter):

Issue Analytics

State:
Created a year ago
Comments:12 (6 by maintainers)

Top GitHub Comments

1reaction

chenzheklcommented, Aug 5, 2022

@jangkj09 There is a nightly package on PyPI. But you may still need a working compiler to install it.

pip install pyg-nightly

0reactions

jangkj09commented, Aug 5, 2022

Thanks!

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