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OSError: /lib64/libm.so.6: version `GLIBC_2.27' not found

See original GitHub issue

📚 Installation

I have followed the instructions on the pytorch geometric website, and am repeatedly getting this error. The issues opened about this haven’t been helpful either. I simply copy and paste the installation commands and get the error. Here’s what I do

pip3 install torch torchvision torchaudio

and

pip3 install torch-scatter torch-sparse torch-cluster torch-spline-conv torch-geometric -f https://data.pyg.org/whl/torch-1.10.0+cu102.html

and when I import torch-spline-conv, I get the following

Traceback (most recent call last):
  File "<stdin>", line 1, in <module>
  File "/gpfs/home/hzaki1/celltypefromgrn/env/lib/python3.7/site-packages/torch_spline_conv/__init__.py", line 15, in <module>
    torch.ops.load_library(spec.origin)
  File "/gpfs/home/hzaki1/celltypefromgrn/env/lib/python3.7/site-packages/torch/_ops.py", line 110, in load_library
    ctypes.CDLL(path)
  File "/gpfs/runtime/opt/python/3.7.4/lib/python3.7/ctypes/__init__.py", line 364, in __init__
    self._handle = _dlopen(self._name, mode)
OSError: /lib64/libm.so.6: version `GLIBC_2.27' not found (required by /gpfs/home/hzaki1/celltypefromgrn/env/lib/python3.7/site-packages/torch_spline_conv/_basis_cuda.so)

Environment

  • OS: Linux
  • Python version: 3.7
  • PyTorch version: 1.10.0
  • CUDA/cuDNN version: 10.2
  • GCC version: 10.2
  • How did you try to install PyTorch Geometric and its extensions (wheel, source): Via the wheel and guide on the website
  • Any other relevant information:

Checklist

  • I followed the installation guide.
  • I cannot find my error message in the FAQ.
  • I set up CUDA correctly and can compile CUDA code via nvcc.
  • I do have multiple CUDA versions on my machine.

Additional context

Issue Analytics

  • State:closed
  • Created 2 years ago
  • Reactions:2
  • Comments:24 (6 by maintainers)

github_iconTop GitHub Comments

26reactions
luyang-ai4medcommented, Sep 1, 2022

version GLIBC_2.27' not found ->> it was also resolved by pip uninstall torch-spline-conv

For A100 cards lowering install versions was not compatible.

12reactions
shahriar-faghanicommented, Dec 2, 2021

📚 Installation

I have followed the instructions on the pytorch geometric website, and am repeatedly getting this error. The issues opened about this haven’t been helpful either. I simply copy and paste the installation commands and get the error. Here’s what I do

pip3 install torch torchvision torchaudio

and

pip3 install torch-scatter torch-sparse torch-cluster torch-spline-conv torch-geometric -f https://data.pyg.org/whl/torch-1.10.0+cu102.html

and when I import torch-spline-conv, I get the following

Traceback (most recent call last):
  File "<stdin>", line 1, in <module>
  File "/gpfs/home/hzaki1/celltypefromgrn/env/lib/python3.7/site-packages/torch_spline_conv/__init__.py", line 15, in <module>
    torch.ops.load_library(spec.origin)
  File "/gpfs/home/hzaki1/celltypefromgrn/env/lib/python3.7/site-packages/torch/_ops.py", line 110, in load_library
    ctypes.CDLL(path)
  File "/gpfs/runtime/opt/python/3.7.4/lib/python3.7/ctypes/__init__.py", line 364, in __init__
    self._handle = _dlopen(self._name, mode)
OSError: /lib64/libm.so.6: version `GLIBC_2.27' not found (required by /gpfs/home/hzaki1/celltypefromgrn/env/lib/python3.7/site-packages/torch_spline_conv/_basis_cuda.so)

Environment

  • OS: Linux
  • Python version: 3.7
  • PyTorch version: 1.10.0
  • CUDA/cuDNN version: 10.2
  • GCC version: 10.2
  • How did you try to install PyTorch Geometric and its extensions (wheel, source): Via the wheel and guide on the website
  • Any other relevant information:

Checklist

  • I followed the installation guide.
  • I cannot find my error message in the FAQ.
  • I set up CUDA correctly and can compile CUDA code via nvcc.
  • I do have multiple CUDA versions on my machine.

Additional context

Same error here!

Read more comments on GitHub >

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