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pipenv check doesn't consider package versions of current environment

See original GitHub issue

Issue description

When running pipenv check, only the site-packages of the user installation are considered instead of the pipenv environment. Is this expected behaviour?

Currently my workaround is to install safety in the environment and then run pipenv run safety check which checks the correct packages.

Expected result

pipenv check runs a safety check on the packages of the current environment

Actual result

pipenv check only checks the user’s site-packages

Steps to replicate

$ pip show pylint
Name: pylint
Version: 2.10.2
Summary: python code static checker
Home-page: https://github.com/PyCQA/pylint
Author: Python Code Quality Authority
Author-email: code-quality@python.org
License: GPL-2.0-or-later
Location: /home/USER/.local/lib/python3.8/site-packages
Requires: astroid, isort, mccabe, platformdirs, toml
Required-by: 

$ pipenv install pylint==2.14.4
Creating a virtualenv for this project...
Pipfile: /home/USER/Downloads/test/Pipfile
Using /home/USER/.pyenv/versions/3.10.5/bin/python3 (3.10.5) to create virtualenv...
⠹ Creating virtual environment...created virtual environment CPython3.10.5.final.0-64 in 101ms
  creator CPython3Posix(dest=/home/USER/.local/share/virtualenvs/test-LQFnpRW5, clear=False, no_vcs_ignore=False, global=False)
  seeder FromAppData(download=False, pip=bundle, setuptools=bundle, wheel=bundle, via=copy, app_data_dir=/home/USER/.local/share/virtualenv)
    added seed packages: pip==22.1.2, setuptools==62.6.0, wheel==0.37.1
  activators BashActivator,CShellActivator,FishActivator,NushellActivator,PowerShellActivator,PythonActivator

✔ Successfully created virtual environment! 
Virtualenv location: /home/USER/.virtualenvs/test-LQFnpRW5
Installing pylint==2.14.4...
Adding pylint to Pipfile's [packages]...
✔ Installation Succeeded 
Pipfile.lock (e4eef2) out of date, updating to (b7beaf)...
Locking [dev-packages] dependencies...
Locking [packages] dependencies...
Building requirements...
Resolving dependencies...
✔ Success! 
Updated Pipfile.lock (b7beaf)!
Installing dependencies from Pipfile.lock (b7beaf)...
  🐍   ▉▉▉▉▉▉▉▉▉▉▉▉▉▉▉▉▉▉▉▉▉▉▉▉▉▉▉▉▉▉▉▉ 0/0 — 00:00:00
To activate this project's virtualenv, run pipenv shell.
Alternatively, run a command inside the virtualenv with pipenv run.

$ pipenv run pip show pylint
Name: pylint
Version: 2.14.4
Summary: python code static checker
Home-page: 
Author: Python Code Quality Authority
Author-email: code-quality@python.org
License: GPL-2.0-or-later
Location: /home/USER/.local/share/virtualenvs/test-LQFnpRW5/lib/python3.10/site-packages
Requires: astroid, dill, isort, mccabe, platformdirs, tomli, tomlkit
Required-by: 

$ pipenv check --verbose
Checking PEP 508 requirements...
Running command: $ /home/USER/.virtualenvs/test-LQFnpRW5/bin/python /home/USER/.local/lib/python3.8/site-packages/pipenv/pep508checker.py
Command output: {"os_name": "posix", "sys_platform": "linux", "platform_machine": "x86_64", "platform_python_implementation": "CPython", "platform_release": "5.13.0-51-generic", "platform_system": "Linux", "platform_version": "#58~20.04.1-Ubuntu SMP Tue Jun 14 11:29:12 UTC 2022", "python_version": "3.10", "python_full_version": "3.10.5", "implementation_name": "cpython", "implementation_version": "3.10.5"}

Passed!
Checking installed package safety...
Running command: $ /home/USER/.virtualenvs/test-LQFnpRW5/bin/python /home/USER/.local/lib/python3.8/site-packages/pipenv/patched/safety check --json
Command output: [
    [
        "pylint",
        "<2.13.0",
        "2.10.2",
        "Pylint 2.13.0 fixes a crash when using the doc_params extension.\r\nhttps://github.com/PyCQA/pylint/issues/5322",
        "45185",
        null,
        null
    ]
]

45185: pylint <2.13.0 resolved (2.10.2 installed)!
Pylint 2.13.0 fixes a crash when using the doc_params extension.
https://github.com/PyCQA/pylint/issues/5322

$ pipenv --support

Pipenv version: '2022.6.7'

Pipenv location: '/home/USER/.local/lib/python3.8/site-packages/pipenv'

Python location: '/usr/bin/python3'

Python installations found:

3.10.5: /home/USER/.pyenv/versions/3.10.5/bin/python3
3.8.13: /home/USER/.pyenv/versions/3.8.13/bin/python3.8
3.8.10: /usr/bin/python3.8
3.8.10: /usr/bin/python3
3.8.10: /bin/python3.8
3.8.10: /bin/python3
3.8.0: /home/USER/.pyenv/versions/3.8.0/bin/python3.8
2.7.18: /usr/bin/python2.7
2.7.18: /usr/bin/python2
2.7.18: /usr/bin/python
2.7.18: /bin/python2.7
2.7.18: /bin/python2
2.7.18: /bin/python

PEP 508 Information:

{'implementation_name': 'cpython',
 'implementation_version': '3.8.10',
 'os_name': 'posix',
 'platform_machine': 'x86_64',
 'platform_python_implementation': 'CPython',
 'platform_release': '5.13.0-51-generic',
 'platform_system': 'Linux',
 'platform_version': '#58~20.04.1-Ubuntu SMP Tue Jun 14 11:29:12 UTC 2022',
 'python_full_version': '3.8.10',
 'python_version': '3.8',
 'sys_platform': 'linux'}

System environment variables:

SHELL
SESSION_MANAGER
QT_ACCESSIBILITY
COLORTERM
PYENV_SHELL
XDG_CONFIG_DIRS
HISTCONTROL
XDG_MENU_PREFIX
GNOME_DESKTOP_SESSION_ID
HISTSIZE
MANDATORY_PATH
LC_ADDRESS
GNOME_SHELL_SESSION_MODE
LC_NAME
SSH_AUTH_SOCK
XMODIFIERS
__GIT_PROMPT_SHOW_UNTRACKED_FILES
DESKTOP_SESSION
LC_MONETARY
SSH_AGENT_PID
GTK_MODULES
PWD
LOGNAME
XDG_SESSION_DESKTOP
XDG_SESSION_TYPE
GPG_AGENT_INFO
XAUTHORITY
WINDOWPATH
HOME
USERNAME
IM_CONFIG_PHASE
LC_PAPER
LANG
LS_COLORS
XDG_CURRENT_DESKTOP
VTE_VERSION
PROMPT_COMMAND
GNOME_TERMINAL_SCREEN
INVOCATION_ID
MANAGERPID
WORKON_HOME
LESSCLOSE
XDG_SESSION_CLASS
TERM
LC_IDENTIFICATION
DEFAULTS_PATH
LESSOPEN
USER
GNOME_TERMINAL_SERVICE
DISPLAY
SHLVL
LC_TELEPHONE
QT_IM_MODULE
LC_MEASUREMENT
CMAKE_BUILD_PARALLEL_LEVEL
DESKTOP_AUTOSTART_ID
XDG_RUNTIME_DIR
PYENV_ROOT
LC_TIME
JOURNAL_STREAM
XDG_DATA_DIRS
PATH
GDMSESSION
HISTFILESIZE
DBUS_SESSION_BUS_ADDRESS
GIT_BRANCH
LC_NUMERIC
OLDPWD
_
PIP_SHIMS_BASE_MODULE
PIP_DISABLE_PIP_VERSION_CHECK
PIP_PYTHON_PATH
PYTHONDONTWRITEBYTECODE
PYTHONFINDER_IGNORE_UNSUPPORTED

Pipenv–specific environment variables:

Debug–specific environment variables:

PATH: /home/USER/.pyenv/shims:/home/USER/.pyenv/bin:/home/USER/.local/bin:/home/USER/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games:/snap/bin
SHELL: /bin/bash
LANG: en_US.UTF-8
PWD: /home/USER/Downloads/test

Contents of Pipfile (‘/home/USER/Downloads/test/Pipfile’):

[[source]]
url = "https://pypi.org/simple"
verify_ssl = true
name = "pypi"

[packages]
pylint = "==2.14.4"
safety = "*"

[dev-packages]

[requires]
python_version = "3.10"

Contents of Pipfile.lock (‘/home/parchent/Downloads/test/Pipfile.lock’):

{
    "_meta": {
        "hash": {
            "sha256": "9d422390fcd6951f029e52351dcc79303c9b120dbdca2c290313e9495bcdde11"
        },
        "pipfile-spec": 6,
        "requires": {
            "python_version": "3.10"
        },
        "sources": [
            {
                "name": "pypi",
                "url": "https://pypi.org/simple",
                "verify_ssl": true
            }
        ]
    },
    "default": {
        "astroid": {
            "hashes": [
                "sha256:4f933d0bf5e408b03a6feb5d23793740c27e07340605f236496cd6ce552043d6",
                "sha256:ba33a82a9a9c06a5ceed98180c5aab16e29c285b828d94696bf32d6015ea82a9"
            ],
            "markers": "python_full_version >= '3.6.2'",
            "version": "==2.11.6"
        },
        "certifi": {
            "hashes": [
                "sha256:84c85a9078b11105f04f3036a9482ae10e4621616db313fe045dd24743a0820d",
                "sha256:fe86415d55e84719d75f8b69414f6438ac3547d2078ab91b67e779ef69378412"
            ],
            "markers": "python_version >= '3.6'",
            "version": "==2022.6.15"
        },
        "charset-normalizer": {
            "hashes": [
                "sha256:5189b6f22b01957427f35b6a08d9a0bc45b46d3788ef5a92e978433c7a35f8a5",
                "sha256:575e708016ff3a5e3681541cb9d79312c416835686d054a23accb873b254f413"
            ],
            "markers": "python_version >= '3.6'",
            "version": "==2.1.0"
        },
        "click": {
            "hashes": [
                "sha256:7682dc8afb30297001674575ea00d1814d808d6a36af415a82bd481d37ba7b8e",
                "sha256:bb4d8133cb15a609f44e8213d9b391b0809795062913b383c62be0ee95b1db48"
            ],
            "markers": "python_version >= '3.7'",
            "version": "==8.1.3"
        },
        "dill": {
            "hashes": [
                "sha256:33501d03270bbe410c72639b350e941882a8b0fd55357580fbc873fba0c59302",
                "sha256:d75e41f3eff1eee599d738e76ba8f4ad98ea229db8b085318aa2b3333a208c86"
            ],
            "markers": "python_version >= '2.7' and python_version not in '3.0, 3.1, 3.2, 3.3, 3.4, 3.5, 3.6'",
            "version": "==0.3.5.1"
        },
        "dparse": {
            "hashes": [
                "sha256:a1b5f169102e1c894f9a7d5ccf6f9402a836a5d24be80a986c7ce9eaed78f367",
                "sha256:e953a25e44ebb60a5c6efc2add4420c177f1d8404509da88da9729202f306994"
            ],
            "markers": "python_version >= '3.5'",
            "version": "==0.5.1"
        },
        "idna": {
            "hashes": [
                "sha256:84d9dd047ffa80596e0f246e2eab0b391788b0503584e8945f2368256d2735ff",
                "sha256:9d643ff0a55b762d5cdb124b8eaa99c66322e2157b69160bc32796e824360e6d"
            ],
            "markers": "python_version >= '3.5'",
            "version": "==3.3"
        },
        "isort": {
            "hashes": [
                "sha256:6f62d78e2f89b4500b080fe3a81690850cd254227f27f75c3a0c491a1f351ba7",
                "sha256:e8443a5e7a020e9d7f97f1d7d9cd17c88bcb3bc7e218bf9cf5095fe550be2951"
            ],
            "markers": "python_version < '4' and python_full_version >= '3.6.1'",
            "version": "==5.10.1"
        },
        "lazy-object-proxy": {
            "hashes": [
                "sha256:043651b6cb706eee4f91854da4a089816a6606c1428fd391573ef8cb642ae4f7",
                "sha256:07fa44286cda977bd4803b656ffc1c9b7e3bc7dff7d34263446aec8f8c96f88a",
                "sha256:12f3bb77efe1367b2515f8cb4790a11cffae889148ad33adad07b9b55e0ab22c",
                "sha256:2052837718516a94940867e16b1bb10edb069ab475c3ad84fd1e1a6dd2c0fcfc",
                "sha256:2130db8ed69a48a3440103d4a520b89d8a9405f1b06e2cc81640509e8bf6548f",
                "sha256:39b0e26725c5023757fc1ab2a89ef9d7ab23b84f9251e28f9cc114d5b59c1b09",
                "sha256:46ff647e76f106bb444b4533bb4153c7370cdf52efc62ccfc1a28bdb3cc95442",
                "sha256:4dca6244e4121c74cc20542c2ca39e5c4a5027c81d112bfb893cf0790f96f57e",
                "sha256:553b0f0d8dbf21890dd66edd771f9b1b5f51bd912fa5f26de4449bfc5af5e029",
                "sha256:677ea950bef409b47e51e733283544ac3d660b709cfce7b187f5ace137960d61",
                "sha256:6a24357267aa976abab660b1d47a34aaf07259a0c3859a34e536f1ee6e76b5bb",
                "sha256:6a6e94c7b02641d1311228a102607ecd576f70734dc3d5e22610111aeacba8a0",
                "sha256:6aff3fe5de0831867092e017cf67e2750c6a1c7d88d84d2481bd84a2e019ec35",
                "sha256:6ecbb350991d6434e1388bee761ece3260e5228952b1f0c46ffc800eb313ff42",
                "sha256:7096a5e0c1115ec82641afbdd70451a144558ea5cf564a896294e346eb611be1",
                "sha256:70ed0c2b380eb6248abdef3cd425fc52f0abd92d2b07ce26359fcbc399f636ad",
                "sha256:8561da8b3dd22d696244d6d0d5330618c993a215070f473b699e00cf1f3f6443",
                "sha256:85b232e791f2229a4f55840ed54706110c80c0a210d076eee093f2b2e33e1bfd",
                "sha256:898322f8d078f2654d275124a8dd19b079080ae977033b713f677afcfc88e2b9",
                "sha256:8f3953eb575b45480db6568306893f0bd9d8dfeeebd46812aa09ca9579595148",
                "sha256:91ba172fc5b03978764d1df5144b4ba4ab13290d7bab7a50f12d8117f8630c38",
                "sha256:9d166602b525bf54ac994cf833c385bfcc341b364e3ee71e3bf5a1336e677b55",
                "sha256:a57d51ed2997e97f3b8e3500c984db50a554bb5db56c50b5dab1b41339b37e36",
                "sha256:b9e89b87c707dd769c4ea91f7a31538888aad05c116a59820f28d59b3ebfe25a",
                "sha256:bb8c5fd1684d60a9902c60ebe276da1f2281a318ca16c1d0a96db28f62e9166b",
                "sha256:c19814163728941bb871240d45c4c30d33b8a2e85972c44d4e63dd7107faba44",
                "sha256:c4ce15276a1a14549d7e81c243b887293904ad2d94ad767f42df91e75fd7b5b6",
                "sha256:c7a683c37a8a24f6428c28c561c80d5f4fd316ddcf0c7cab999b15ab3f5c5c69",
                "sha256:d609c75b986def706743cdebe5e47553f4a5a1da9c5ff66d76013ef396b5a8a4",
                "sha256:d66906d5785da8e0be7360912e99c9188b70f52c422f9fc18223347235691a84",
                "sha256:dd7ed7429dbb6c494aa9bc4e09d94b778a3579be699f9d67da7e6804c422d3de",
                "sha256:df2631f9d67259dc9620d831384ed7732a198eb434eadf69aea95ad18c587a28",
                "sha256:e368b7f7eac182a59ff1f81d5f3802161932a41dc1b1cc45c1f757dc876b5d2c",
                "sha256:e40f2013d96d30217a51eeb1db28c9ac41e9d0ee915ef9d00da639c5b63f01a1",
                "sha256:f769457a639403073968d118bc70110e7dce294688009f5c24ab78800ae56dc8",
                "sha256:fccdf7c2c5821a8cbd0a9440a456f5050492f2270bd54e94360cac663398739b",
                "sha256:fd45683c3caddf83abbb1249b653a266e7069a09f486daa8863fb0e7496a9fdb"
            ],
            "markers": "python_version >= '3.6'",
            "version": "==1.7.1"
        },
        "mccabe": {
            "hashes": [
                "sha256:348e0240c33b60bbdf4e523192ef919f28cb2c3d7d5c7794f74009290f236325",
                "sha256:6c2d30ab6be0e4a46919781807b4f0d834ebdd6c6e3dca0bda5a15f863427b6e"
            ],
            "markers": "python_version >= '3.6'",
            "version": "==0.7.0"
        },
        "packaging": {
            "hashes": [
                "sha256:dd47c42927d89ab911e606518907cc2d3a1f38bbd026385970643f9c5b8ecfeb",
                "sha256:ef103e05f519cdc783ae24ea4e2e0f508a9c99b2d4969652eed6a2e1ea5bd522"
            ],
            "markers": "python_version >= '3.6'",
            "version": "==21.3"
        },
        "platformdirs": {
            "hashes": [
                "sha256:027d8e83a2d7de06bbac4e5ef7e023c02b863d7ea5d079477e722bb41ab25788",
                "sha256:58c8abb07dcb441e6ee4b11d8df0ac856038f944ab98b7be6b27b2a3c7feef19"
            ],
            "markers": "python_version >= '3.7'",
            "version": "==2.5.2"
        },
        "pylint": {
            "hashes": [
                "sha256:47705453aa9dce520e123a7d51843d5f0032cbfa06870f89f00927aa1f735a4a",
                "sha256:89b61867db16eefb7b3c5b84afc94081edaf11544189e2b238154677529ad69f"
            ],
            "index": "pypi",
            "version": "==2.14.4"
        },
        "pyparsing": {
            "hashes": [
                "sha256:2b020ecf7d21b687f219b71ecad3631f644a47f01403fa1d1036b0c6416d70fb",
                "sha256:5026bae9a10eeaefb61dab2f09052b9f4307d44aee4eda64b309723d8d206bbc"
            ],
            "markers": "python_full_version >= '3.6.8'",
            "version": "==3.0.9"
        },
        "pyyaml": {
            "hashes": [
                "sha256:0283c35a6a9fbf047493e3a0ce8d79ef5030852c51e9d911a27badfde0605293",
                "sha256:055d937d65826939cb044fc8c9b08889e8c743fdc6a32b33e2390f66013e449b",
                "sha256:07751360502caac1c067a8132d150cf3d61339af5691fe9e87803040dbc5db57",
                "sha256:0b4624f379dab24d3725ffde76559cff63d9ec94e1736b556dacdfebe5ab6d4b",
                "sha256:0ce82d761c532fe4ec3f87fc45688bdd3a4c1dc5e0b4a19814b9009a29baefd4",
                "sha256:1e4747bc279b4f613a09eb64bba2ba602d8a6664c6ce6396a4d0cd413a50ce07",
                "sha256:213c60cd50106436cc818accf5baa1aba61c0189ff610f64f4a3e8c6726218ba",
                "sha256:231710d57adfd809ef5d34183b8ed1eeae3f76459c18fb4a0b373ad56bedcdd9",
                "sha256:277a0ef2981ca40581a47093e9e2d13b3f1fbbeffae064c1d21bfceba2030287",
                "sha256:2cd5df3de48857ed0544b34e2d40e9fac445930039f3cfe4bcc592a1f836d513",
                "sha256:40527857252b61eacd1d9af500c3337ba8deb8fc298940291486c465c8b46ec0",
                "sha256:473f9edb243cb1935ab5a084eb238d842fb8f404ed2193a915d1784b5a6b5fc0",
                "sha256:48c346915c114f5fdb3ead70312bd042a953a8ce5c7106d5bfb1a5254e47da92",
                "sha256:50602afada6d6cbfad699b0c7bb50d5ccffa7e46a3d738092afddc1f9758427f",
                "sha256:68fb519c14306fec9720a2a5b45bc9f0c8d1b9c72adf45c37baedfcd949c35a2",
                "sha256:77f396e6ef4c73fdc33a9157446466f1cff553d979bd00ecb64385760c6babdc",
                "sha256:819b3830a1543db06c4d4b865e70ded25be52a2e0631ccd2f6a47a2822f2fd7c",
                "sha256:897b80890765f037df3403d22bab41627ca8811ae55e9a722fd0392850ec4d86",
                "sha256:98c4d36e99714e55cfbaaee6dd5badbc9a1ec339ebfc3b1f52e293aee6bb71a4",
                "sha256:9df7ed3b3d2e0ecfe09e14741b857df43adb5a3ddadc919a2d94fbdf78fea53c",
                "sha256:9fa600030013c4de8165339db93d182b9431076eb98eb40ee068700c9c813e34",
                "sha256:a80a78046a72361de73f8f395f1f1e49f956c6be882eed58505a15f3e430962b",
                "sha256:b3d267842bf12586ba6c734f89d1f5b871df0273157918b0ccefa29deb05c21c",
                "sha256:b5b9eccad747aabaaffbc6064800670f0c297e52c12754eb1d976c57e4f74dcb",
                "sha256:c5687b8d43cf58545ade1fe3e055f70eac7a5a1a0bf42824308d868289a95737",
                "sha256:cba8c411ef271aa037d7357a2bc8f9ee8b58b9965831d9e51baf703280dc73d3",
                "sha256:d15a181d1ecd0d4270dc32edb46f7cb7733c7c508857278d3d378d14d606db2d",
                "sha256:d4db7c7aef085872ef65a8fd7d6d09a14ae91f691dec3e87ee5ee0539d516f53",
                "sha256:d4eccecf9adf6fbcc6861a38015c2a64f38b9d94838ac1810a9023a0609e1b78",
                "sha256:d67d839ede4ed1b28a4e8909735fc992a923cdb84e618544973d7dfc71540803",
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}

Issue Analytics

State:
Created a year ago
Comments:6

Top GitHub Comments

1reaction

matteiuscommented, Nov 24, 2022

Ok sorry about that – there was still an issue with the wheel not including the rumael vendoring. I just verified that new release 2022.11.25 does in fact include the required ruamel, and a fix for this issue.

1reaction

ypsahcommented, Nov 23, 2022

Hi @matteius, issue is still happening (though wheel was updated on archlinux so the reproducer doesn’t quite work anymore).

I believe the rest off my last message gives a pretty good description of why the issue occurs and how to fix it. Please let me know if have any question about it.

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