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Update Maven Project not working in 4.16.0

See original GitHub issue

Describe the bug Update Maven Project is not working in 4.16.0.

To Reproduce Update Eclipse STS from 4.15.3 to 4.16.0 and run update maven project.

Sample An internal error occurred during: “Updating Maven Project”. Cannot invoke “org.eclipse.jdt.internal.compiler.util.JrtFileSystem.walkModuleImage(org.eclipse.jdt.internal.compiler.util.JRTUtil$JrtFileVisitor, int)” because the return value of “org.eclipse.jdt.internal.compiler.util.JRTUtil.getJrtSystem(java.io.File, String)” is null

CONFIGURATION

Windows 11 Pro - 21H2 - 22000.978 - Windows Feature Experience Pack 1000.22000.978.0

c:>java -version java version “17” 2021-09-14 LTS Java™ SE Runtime Environment (build 17+35-LTS-2724) Java HotSpot™ 64-Bit Server VM (build 17+35-LTS-2724, mixed mode, sharing)

Eclipse STS Version 4.16.0.RELEASE Build Id: 202209151144

Eclipse installed software

ANTLR                                                                               ----- 4.7.1
AnyEditTools                                                                        ----- 2.7.2.202006062100
BOSH Language Server Feature                                                        ----- 4.16.0.202209151102
Buildship: Eclipse Plug-ins for Gradle                                              ----- 3.1.6.v20220511-1359
Cloud Foundry Manifest Language Server Feature                                      ----- 4.16.0.202209151102
Concourse Pipeline Language Server Feature                                          ----- 4.16.0.202209151102
Docker Tooling                                                                      ----- 5.8.0.202209062047
Eclipse Help System                                                                 ----- 2.3.1100.v20220831-1800
Eclipse Java Development Tools                                                      ----- 3.18.1300.v20220831-1800
Eclipse Java EE Developer Tools                                                     ----- 3.27.0.v202206160204
Eclipse Java Web Developer Tools                                                    ----- 3.27.0.v202206160204
Eclipse Java Web Developer Tools - JavaScript Support                               ----- 3.27.0.v202206160204
Eclipse Plug-in Development Environment                                             ----- 3.14.1300.v20220831-1800
Eclipse Web Developer Tools                                                         ----- 3.27.0.v202208280234
Eclipse Web JavaScript Developer Tools                                              ----- 3.22.0.v202207121749
Eclipse XML Editors and Tools                                                       ----- 3.27.0.v202208280234
Equinox p2, Provisioning for IDEs.                                                  ----- 2.4.1700.v20220819-1949
Git integration for Eclipse                                                         ----- 6.3.0.202209071007-r
Git integration for Eclipse - Gitflow support                                       ----- 6.3.0.202209071007-r
Java implementation of Git                                                          ----- 6.3.0.202209071007-r
Java implementation of Git - optional LFS support                                   ----- 6.3.0.202209071007-r
JDT Docker Launcher                                                                 ----- 5.8.0.202209062047
JSON Editor Plugin                                                                  ----- 1.1.3
JST Server Adapters                                                                 ----- 3.2.700.v202204301608
JST Server Adapters Extensions (Apache Tomcat)                                      ----- 3.4.500.v202208260501
JST Server UI                                                                       ----- 3.4.500.v202103180201
JustJ Adoptium OpenJDK Hotspot JRE Complete                                         ----- 17.0.4.v20220903-1038
M2E - Maven Integration for Eclipse                                                 ----- 2.0.5.20220912-1211
M2E - POM Editor using LemMinX language server (includes Incubating components)     ----- 2.0.0.20220729-1256
M2E - SLF4J over Logback Logging                                                    ----- 2.0.0.20220717-0848
m2e connector for WRO4J                                                             ----- 1.2.0.202209071019
m2e-wtp - Maven Integration for WTP                                                 ----- 1.5.2.20220906-1452
Markdown Editor                                                                     ----- 1.2.0.201501260515
Marketplace Client                                                                  ----- 1.10.0.v20220502-0731
Mylyn WikiText Editors                                                              ----- 3.0.42.202201072301
SonarLint for Eclipse                                                               ----- 7.4.0.46482
SpotBugs                                                                            ----- 4.7.2.r202209050352-1f42a5b
Spring Boot Language Server Feature                                                 ----- 4.16.0.202209151102
Spring IDE Boot Microservices Dash                                                  ----- 4.16.0.202209151144
Spring Tool Suite 4                                                                 ----- 4.16.0.202209151144
Spring Tool Suite 4 Main Feature                                                    ----- 4.16.0.202209151144
Spring XML Namespace Support                                                        ----- 4.16.0.202209151144
Tip of the Day UI Feature                                                           ----- 0.2.1800.v20220811-0542
TM Terminal                                                                         ----- 10.7.1.202208160035
Wild Web Developer HTML, CSS, JSON, Yaml, JavaScript, TypeScript, Node tools        ----- 0.11.0.202206231201
Wild Web Developer XML tools                                                        ----- 0.15.0.202207081036
WST Server Adapters                                                                 ----- 3.2.1000.v202208120424
WST Server UI                                                                       ----- 3.3.1300.v202208260501

pom.xml

<?xml version="1.0" encoding="UTF-8"?>
<project
    xmlns="http://maven.apache.org/POM/4.0.0"
    xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
    xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd"
>
    <modelVersion>4.0.0</modelVersion>

    <name>The Vegan Catalog</name>
    <description>The Best World Vegan Catalog by H.Lo</description>

    <groupId>com.thevegcat</groupId>
    <artifactId>TheVegCat</artifactId>

    <version>1.8</version>

    <packaging>war</packaging>

    <developers>
        <developer>
            <id>HLo</id>
            <name>Hrvoje Lončar</name>
            <email>horvoje@gmail.com</email>
        </developer>
    </developers>

    <parent>
        <groupId>org.springframework.boot</groupId>
        <artifactId>spring-boot-starter-parent</artifactId>
        <version>2.6.7</version> 
        <relativePath /><!-- lookup parent from repository -->
    </parent>

    <properties>
        <java.version>11</java.version>
        <project.build.sourceEncoding>UTF-8</project.build.sourceEncoding>
        <project.reporting.outputEncoding>UTF-8</project.reporting.outputEncoding>
        <hibernate.version>5.6.11.Final</hibernate.version>                 
        <hibernate-search-orm.version>5.11.10.Final</hibernate-search-orm.version>     
        <blaze-persistence.version>1.6.7</blaze-persistence.version>                
        <lombok.version>1.18.24</lombok.version>                         
        <jsoup.version>1.15.3</jsoup.version>                           
        <querydsl.version>5.0.0</querydsl.version>                         
        <apt-maven-plugin.version>1.1.3</apt-maven-plugin.version>                 
        <tika-core.version>2.4.1</tika-core.version>                        
        <opencsv.version>5.7.0</opencsv.version>                          
        <caffeine.version>3.1.1</caffeine.version>                         
        <commons-io.version>2.11.0</commons-io.version>                      
        <org.eclipse.jdt.annotation.version>2.2.700</org.eclipse.jdt.annotation.version>     
        <junit-jupiter.version>5.9.0</junit-jupiter.version>                    
        <jacoco-maven-plugin.version>0.8.8</jacoco-maven-plugin.version>              
        <groovy-all.version>3.0.12</groovy-all.version>                      
        <springloaded.version>1.2.8.RELEASE</springloaded.version>             
        <junit-platform-surefire-provider.version>1.3.2</junit-platform-surefire-provider.version> 
        <json-simple.version>1.1.1</json-simple.version>                      
        <htmlcompressor.version>1.5.2</htmlcompressor.version>                   
    </properties>

    <dependencies>

        <!-- ===== BEGIN: SPRING BOOT ===== -->

            <!-- https://mvnrepository.com/artifact/org.springframework.boot/spring-boot-starter-web -->
            <dependency>
                <groupId>org.springframework.boot</groupId>
                <artifactId>spring-boot-starter-web</artifactId>
                <exclusions>
                    <!-- https://mvnrepository.com/artifact/org.springframework.boot/spring-boot-starter-logging -->
                    <exclusion>
                        <groupId>org.springframework.boot</groupId>
                        <artifactId>spring-boot-starter-logging</artifactId>
                    </exclusion>
                    <!-- remove old JUnit -->
                    <!-- https://mvnrepository.com/artifact/junit/junit -->
                    <exclusion>
                        <groupId>junit</groupId>
                        <artifactId>junit</artifactId>
                    </exclusion>
                </exclusions>
            </dependency>

            <!-- https://mvnrepository.com/artifact/org.springframework.boot/spring-boot-starter-security -->
            <dependency>
                <groupId>org.springframework.boot</groupId>
                <artifactId>spring-boot-starter-security</artifactId>
            </dependency>

            <!-- https://mvnrepository.com/artifact/org.springframework.boot/spring-boot-starter-data-jpa -->
            <dependency>
                <groupId>org.springframework.boot</groupId>
                <artifactId>spring-boot-starter-data-jpa</artifactId>
            </dependency>

            <!-- https://mvnrepository.com/artifact/org.springframework.boot/spring-boot-starter-cache -->
            <dependency>
                <groupId>org.springframework.boot</groupId>
                <artifactId>spring-boot-starter-cache</artifactId>
            </dependency>

            <!-- https://mvnrepository.com/artifact/org.springframework.boot/spring-boot-starter-thymeleaf -->
            <dependency>
                <groupId>org.springframework.boot</groupId>
                <artifactId>spring-boot-starter-thymeleaf</artifactId>
            </dependency>

            <!-- https://mvnrepository.com/artifact/org.springframework.boot/spring-boot-starter-log4j2 -->
            <dependency>
                <groupId>org.springframework.boot</groupId>
                <artifactId>spring-boot-starter-log4j2</artifactId>
            </dependency>

            <!-- https://mvnrepository.com/artifact/org.springframework.boot/spring-boot-configuration-processor -->
            <dependency>
                <groupId>org.springframework.boot</groupId>
                <artifactId>spring-boot-configuration-processor</artifactId>
                <optional>true</optional>
            </dependency>

            <!-- https://mvnrepository.com/artifact/org.springframework.boot/spring-boot-devtools -->
            <dependency>
                <groupId>org.springframework.boot</groupId>
                <artifactId>spring-boot-devtools</artifactId>
                <optional>true</optional>
            </dependency>

        <!-- ===== END: SPRING BOOT ===== -->

        <!-- ===== BEGIN: SPRING BOOT MANAGED VERSIONS ===== -->

            <!-- WARNING! Spring Boot removed this in Spring Boot version 2.3.0 but its version 2.0.2 is still defined in Spring Boot's (parent) POM -->
            <!-- WARNING! Version 3.0.0. breaks NotNull annotation -->
            <!-- https://mvnrepository.com/artifact/jakarta.validation/jakarta.validation-api -->
            <dependency>
                <groupId>jakarta.validation</groupId>
                <artifactId>jakarta.validation-api</artifactId>
            </dependency>

            <!-- https://mvnrepository.com/artifact/org.thymeleaf.extras/thymeleaf-extras-java8time -->
            <dependency>
                <groupId>org.thymeleaf.extras</groupId>
                <artifactId>thymeleaf-extras-java8time</artifactId>
            </dependency>

            <!-- https://mvnrepository.com/artifact/com.querydsl/querydsl-apt -->
            <dependency>
                <groupId>com.querydsl</groupId>
                <artifactId>querydsl-apt</artifactId>
                <scope>provided</scope>
            </dependency>

            <!-- https://mvnrepository.com/artifact/com.querydsl/querydsl-jpa -->
            <dependency>
                <groupId>com.querydsl</groupId>
                <artifactId>querydsl-jpa</artifactId>
            </dependency>

            <!-- https://mvnrepository.com/artifact/org.thymeleaf.extras/thymeleaf-extras-springsecurity5 -->
            <dependency>
                <groupId>org.thymeleaf.extras</groupId>
                <artifactId>thymeleaf-extras-springsecurity5</artifactId>
            </dependency>

            <!-- https://mvnrepository.com/artifact/mysql/mysql-connector-java -->
            <dependency>
                <groupId>mysql</groupId>
                <artifactId>mysql-connector-java</artifactId>
                <scope>runtime</scope>
            </dependency>

            <!-- https://mvnrepository.com/artifact/javax.persistence/javax.persistence-api -->
            <dependency>
                <groupId>javax.persistence</groupId>
                <artifactId>javax.persistence-api</artifactId>
            </dependency>

            <!-- https://mvnrepository.com/artifact/org.apache.commons/commons-lang3 -->
            <dependency>
                <groupId>org.apache.commons</groupId>
                <artifactId>commons-lang3</artifactId>
            </dependency>

            <!-- https://mvnrepository.com/artifact/org.projectlombok/lombok -->
            <dependency>
                <groupId>org.projectlombok</groupId>
                <artifactId>lombok</artifactId>
                <scope>provided</scope>
            </dependency>

            <!-- https://mvnrepository.com/artifact/com.fasterxml.jackson.core/jackson-databind -->
            <dependency>
                <groupId>com.fasterxml.jackson.core</groupId>
                <artifactId>jackson-databind</artifactId>
            </dependency>

			<!-- cache provider that supports expire options -->
			<!-- https://mvnrepository.com/artifact/com.github.ben-manes.caffeine/caffeine -->
			<dependency>
				<groupId>com.github.ben-manes.caffeine</groupId>
				<artifactId>caffeine</artifactId>
				<version>${caffeine.version}</version>
			</dependency>

        <!-- ===== END: SPRING BOOT MANAGED VERSIONS ===== -->

        <!-- ===== BEGIN: MANUALLY MANAGED VERSIONS ===== -->

            <dependency>
                <groupId>org.codehaus.groovy</groupId>
                <artifactId>groovy-all</artifactId>
                <version>${groovy-all.version}</version>
                <type>pom</type>
                <!-- remove old JUnit -->
                <!-- https://mvnrepository.com/artifact/junit/junit -->
                <exclusions>
                    <exclusion>
                        <groupId>junit</groupId>
                        <artifactId>junit</artifactId>
                    </exclusion>
                </exclusions>
            </dependency>

            <dependency>
                <groupId>org.hibernate</groupId>
                <artifactId>hibernate-search-orm</artifactId>
                <version>${hibernate-search-orm.version}</version>
            </dependency>

            <!-- ===== BEGIN: BLAZE PERSISTENCE ===== -->

                <!-- https://mvnrepository.com/artifact/com.blazebit/blaze-persistence-core-api -->
                <dependency>
                    <groupId>com.blazebit</groupId>
                    <artifactId>blaze-persistence-core-api</artifactId>
                    <version>${blaze-persistence.version}</version>
                </dependency>

                <!-- https://mvnrepository.com/artifact/com.blazebit/blaze-persistence-core-impl -->
                <dependency>
                    <groupId>com.blazebit</groupId>
                    <artifactId>blaze-persistence-core-impl</artifactId>
                    <version>${blaze-persistence.version}</version>
                </dependency>

                <!-- https://mvnrepository.com/artifact/com.blazebit/blaze-persistence-integration-hibernate-base -->
                <dependency>
                    <groupId>com.blazebit</groupId>
                    <artifactId>blaze-persistence-integration-hibernate-base</artifactId>
                    <version>${blaze-persistence.version}</version>
                </dependency>

                <!-- https://mvnrepository.com/artifact/com.blazebit/blaze-persistence-integration-hibernate-5.4 -->
                <dependency>
                    <groupId>com.blazebit</groupId>
                    <artifactId>blaze-persistence-integration-hibernate-5.6</artifactId>
                    <version>${blaze-persistence.version}</version>
                </dependency>

                <!-- https://mvnrepository.com/artifact/com.blazebit/blaze-persistence-integration-querydsl-expressions -->
                <dependency>
                    <groupId>com.blazebit</groupId>
                    <artifactId>blaze-persistence-integration-querydsl-expressions</artifactId>
                    <version>${blaze-persistence.version}</version>
                </dependency>

            <!-- ===== END: BLAZE PERSISTENCE ===== -->

            <dependency>
                <groupId>commons-io</groupId>
                <artifactId>commons-io</artifactId>
                <version>${commons-io.version}</version>
            </dependency>

            <!-- content type resolver -->
            <dependency>
                <groupId>org.apache.tika</groupId>
                <artifactId>tika-core</artifactId>
                <version>${tika-core.version}</version>
            </dependency>

            <!-- Java HTML Parser -->
            <dependency>
                <groupId>org.jsoup</groupId>
                <artifactId>jsoup</artifactId>
                <version>${jsoup.version}</version>
            </dependency>

            <dependency>
                <groupId>com.googlecode.htmlcompressor</groupId>
                <artifactId>htmlcompressor</artifactId>
                <version>${htmlcompressor.version}</version>
            </dependency>

        <!-- ===== END: MANUALLY MANAGED VERSIONS ===== -->

        <!-- ===== SCOPE: TEST ===== -->

            <!-- https://mvnrepository.com/artifact/org.springframework.boot/spring-boot-starter-test -->
            <dependency>
                <groupId>org.springframework.boot</groupId>
                <artifactId>spring-boot-starter-test</artifactId>
                <scope>test</scope>
                <exclusions>
                    <!-- remove old JUnit -->
                    <!-- https://mvnrepository.com/artifact/junit/junit -->
                    <exclusion>
                        <groupId>junit</groupId>
                        <artifactId>junit</artifactId>
                    </exclusion>
                    <exclusion>
                        <groupId>org.junit.vintage</groupId>
                        <artifactId>junit-vintage-engine</artifactId>
                    </exclusion>
                </exclusions>
            </dependency>

            <!-- https://mvnrepository.com/artifact/org.springframework.security/spring-security-test -->
            <dependency>
                <groupId>org.springframework.security</groupId>
                <artifactId>spring-security-test</artifactId>
                <scope>test</scope>
            </dependency>

            <!-- https://mvnrepository.com/artifact/io.rest-assured/rest-assured -->
            <dependency>
                <groupId>io.rest-assured</groupId>
                <artifactId>rest-assured</artifactId>
                <scope>test</scope>
            </dependency>

            <!-- https://mvnrepository.com/artifact/org.junit.jupiter/junit-jupiter-api -->
            <dependency>
                <groupId>org.junit.jupiter</groupId>
                <artifactId>junit-jupiter-api</artifactId>
                <scope>test</scope>
            </dependency>

            <dependency>
                <groupId>org.junit.jupiter</groupId>
                <artifactId>junit-jupiter-engine</artifactId>
                <scope>test</scope>
            </dependency>

            <!-- https://mvnrepository.com/artifact/org.junit.platform/junit-platform-launcher -->
            <dependency>
                <groupId>org.junit.platform</groupId>
                <artifactId>junit-platform-launcher</artifactId>
                <scope>test</scope>
            </dependency>

            <!-- https://mvnrepository.com/artifact/org.mockito/mockito-junit-jupiter -->
            <dependency>
                <groupId>org.mockito</groupId>
                <artifactId>mockito-junit-jupiter</artifactId>
                <scope>test</scope>
            </dependency>

            <dependency>
                <groupId>com.opencsv</groupId>
                <artifactId>opencsv</artifactId>
                <version>${opencsv.version}</version>
                <scope>test</scope>
            </dependency>

            <dependency>
                <groupId>com.googlecode.json-simple</groupId>
                <artifactId>json-simple</artifactId>
                <version>${json-simple.version}</version>
                <scope>test</scope>
                <!-- remove old JUnit -->
                <!-- https://mvnrepository.com/artifact/junit/junit -->
                <exclusions>
                    <exclusion>
                        <groupId>junit</groupId>
                        <artifactId>junit</artifactId>
                    </exclusion>
                </exclusions>
            </dependency>

            <dependency>
                <groupId>com.h2database</groupId>
                <artifactId>h2</artifactId>
                <scope>test</scope>
            </dependency>

        <!-- ===== END SCOPE: TEST ===== -->

    </dependencies>

    <build>

        <plugins>

            <!-- https://www.vojtechruzicka.com/spring-boot-version/ -->
            <!-- Detecting build version and time at runtime in Spring Boot -->
            <plugin>
                <groupId>org.springframework.boot</groupId>
                <artifactId>spring-boot-maven-plugin</artifactId>
                <executions>
                    <execution>
                        <id>build-info</id>
                        <goals>
                            <goal>build-info</goal>
                        </goals>
                    </execution>
                </executions>
            </plugin>

            <plugin>
                <groupId>org.apache.maven.plugins</groupId>
                <artifactId>maven-compiler-plugin</artifactId>
                <configuration>
                    <source>${java.version}</source>
                    <target>${java.version}</target>
                    <annotationProcessorPaths>
                        <path>
                            <groupId>org.projectlombok</groupId>
                            <artifactId>lombok</artifactId>
                            <version>${lombok.version}</version>
                        </path>
                    </annotationProcessorPaths>
                </configuration>
            </plugin>

            <!-- https://maven.apache.org/plugins/maven-war-plugin/examples/including-excluding-files-from-war.html -->
            <plugin>
                <artifactId>maven-war-plugin</artifactId>
                <configuration>
                    <packagingExcludes>WEB-INF/classes/test/*.*, WEB-INF/classes/static/images/products/*.*, WEB-INF/classes/static/images/manufacturers/*.*, WEB-INF/classes/static/images/providers/*.*</packagingExcludes>
                </configuration>
            </plugin>

            <!-- https://mvnrepository.com/artifact/org.apache.maven.plugins/maven-surefire-plugin -->
            <!-- https://springframework.guru/why-your-junit-5-tests-are-not-running-under-maven/ -->
            <plugin>
                <groupId>org.apache.maven.plugins</groupId>
                <artifactId>maven-surefire-plugin</artifactId>
                <dependencies>
                    <dependency>
                        <groupId>org.junit.platform</groupId>
                        <artifactId>junit-platform-surefire-provider</artifactId>
                        <version>${junit-platform-surefire-provider.version}</version>
                    </dependency>
                </dependencies>
            </plugin>

            <plugin>
                <groupId>com.mysema.maven</groupId>
                <artifactId>apt-maven-plugin</artifactId>
                <version>${apt-maven-plugin.version}</version>
                <executions>
                    <execution>
                        <goals>
                            <goal>process</goal>
                        </goals>
                        <configuration>
                            <outputDirectory>target/generated-sources/java</outputDirectory>
                            <processor>com.querydsl.apt.jpa.JPAAnnotationProcessor</processor>
                        </configuration>
                    </execution>
                </executions>
            </plugin>

            <plugin>
                <groupId>org.jacoco</groupId>
                <artifactId>jacoco-maven-plugin</artifactId>
                <version>${jacoco-maven-plugin.version}</version>
                <executions>
                    <execution>
                        <id>prepare-agent</id>
                        <goals>
                            <goal>prepare-agent</goal>
                        </goals>
                    </execution>
                    <execution>
                        <id>report</id>
                        <phase>prepare-package</phase>
                        <goals>
                            <goal>report</goal>
                        </goals>
                    </execution>
                    <execution>
                        <id>post-unit-test</id>
                        <phase>test</phase>
                        <goals>
                            <goal>report</goal>
                        </goals>
                        <configuration>
                            <dataFile>target/jacoco.exec</dataFile>
                            <outputDirectory>target/jacoco-ut</outputDirectory>
                        </configuration>
                    </execution>
                </executions>
                <configuration>
                    <systemPropertyVariables>
                        <jacoco-agent.destfile>target/jacoco.exec</jacoco-agent.destfile>
                    </systemPropertyVariables>
                </configuration>
            </plugin>

        </plugins>

    </build>

</project>

Issue Analytics

  • State:closed
  • Created a year ago
  • Comments:16 (5 by maintainers)

github_iconTop GitHub Comments

1reaction
martinlippertcommented, Sep 19, 2022

Looks like the JRE you are adding to the preferences is somehow not compatible or not working as expected from the tooling perspective. In case you can provide clear steps how to reproduce this (e.g. which JRE is causing the issue and where to get it from, where is needs to be installed in order to cause the issue, etc.), it might be worth filing an issue with the JDT project in order to get their feedback on this.

For now, I will close the issue here, since you found the underlying problem with the installed JRE and it doesn’t seem to be related to the Spring Tools part of your IDE, so closing this here seems like a good choice to me.

Thanks again for reporting this and for trying all the various things that we suggested here. Much appreciated!!!

0reactions
H-Locommented, Sep 19, 2022

@martinlippert Ok, more news, don’t know good or bad. New workspace has been using Java from Eclipse STS installation E:\app\sts-4.16.0.RELEASE\plugins\org.eclipse.justj.openjdk.hotspot.jre.full.win32.x86_64_17.0.4.v20220903-1038\jre and everything was working fine.

Then I added JRE using Preferences -> Installed JREs and when I set this one as default, that’s the moment when things stop working.

Switching back to Java bundled with Eclipse STS, it works again.

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