question-mark
Stuck on an issue?

Lightrun Answers was designed to reduce the constant googling that comes with debugging 3rd party libraries. It collects links to all the places you might be looking at while hunting down a tough bug.

And, if you’re still stuck at the end, we’re happy to hop on a call to see how we can help out.

rtree dependency error

See original GitHub issue

Like other issues reported complaining about spyder-kernels error on startup I receive this message:

You have missing dependencies!

# Mandatory:
rtree >=0.8.3 : None (NOK)
spyder-kernels >=2.0.1,<2.1.0 : 2.0.1 (NOK)

Please install them to avoid this message.

Below the conda list command filtering these packages.

(myenv) PS C:\Users\EPEV> conda list | Select-String -Pattern "rtree|^spyder"

rtree                     0.9.7            py38h8b54edf_1    conda-forge
spyder                    5.0.0            py38haa244fe_0    conda-forge
spyder-kernels            2.0.1            py38haa244fe_0    conda-forge

Issue Analytics

  • State:closed
  • Created 2 years ago
  • Comments:12 (3 by maintainers)

github_iconTop GitHub Comments

1reaction
charliedivescommented, Apr 20, 2021

Thank you so much…I’m a newbie and I was going crazy trying to get Spyder working after upgrading to v5…which must have brought Python 3.8.8 along for the ride

0reactions
ccordoba12commented, Apr 19, 2021

Good to know! Thanks for letting us know about it @sweettyler.

Read more comments on GitHub >

github_iconTop Results From Across the Web

Spyder 4.2.1 - erroneous missing rtree dependency #14466
When I start spyder, a window pops up and states that a dependency is missing, namely rtree >=0.8.3. However, rtree 0.9.5 is installed....
Read more >
Missing dependancies of rtree - python - Stack Overflow
It looks like Rtree requires libspatialindex (https://libspatialindex.org) which is not automatically installed.
Read more >
Missing dependencies - Mandatory rtree >= 0.8.3: None (NOK)
I think this is a known bug in Spyder and there really is not a missing dependency. . We will have to wait...
Read more >
geopandas spatial join rtree failure dependency(??) - Kaggle
hi, i'm new to kaggle, python, geospatial - so let's get that out of the way, that there's some possible user error going...
Read more >
Attempting to install osmnx fails at rtree dependency in pip3
When I attempt with pip3 I run into an error at Rtree package that states the ... This seems to be some pip...
Read more >

github_iconTop Related Medium Post

No results found

github_iconTop Related StackOverflow Question

No results found

github_iconTroubleshoot Live Code

Lightrun enables developers to add logs, metrics and snapshots to live code - no restarts or redeploys required.
Start Free

github_iconTop Related Reddit Thread

No results found

github_iconTop Related Hackernoon Post

No results found

github_iconTop Related Tweet

No results found

github_iconTop Related Dev.to Post

No results found

github_iconTop Related Hashnode Post

No results found