question-mark
Stuck on an issue?

Lightrun Answers was designed to reduce the constant googling that comes with debugging 3rd party libraries. It collects links to all the places you might be looking at while hunting down a tough bug.

And, if you’re still stuck at the end, we’re happy to hop on a call to see how we can help out.

No train metrics show up in scalar plots

See original GitHub issue

Consider Stack Overflow for getting support using TensorBoard—they have a larger community with better searchability:

https://stackoverflow.com/questions/tagged/tensorboard

Do not use this template for for setup, installation, or configuration issues. Instead, use the “installation problem” issue template:

https://github.com/tensorflow/tensorboard/issues/new?template=installation_problem.md

To report a problem with TensorBoard itself, please fill out the remainder of this template.

Environment information (required)

Please run diagnose_tensorboard.py (link below) in the same environment from which you normally run TensorFlow/TensorBoard, and paste the output here:

https://raw.githubusercontent.com/tensorflow/tensorboard/master/tensorboard/tools/diagnose_tensorboard.py

Diagnostics

Diagnostics output
--- check: autoidentify                                                                                                                                                                       
INFO: diagnose_tensorboard.py version 4725c70c7ed724e2d1b9ba5618d7c30b957ee8a4                                                                                                                


--- check: general                                                                                                                                                                            
INFO: sys.version_info: sys.version_info(major=3, minor=6, micro=8, releaselevel='final', serial=0)                                                                                           
INFO: os.name: posix                                                                                                                                                                          
INFO: os.uname(): posix.uname_result(sysname='Linux', nodename='master1', release='4.15.0-66-generic', version='#75-Ubuntu SMP Tue Oct 1 05:24:09 UTC 2019', machine='x86_64')                
INFO: sys.getwindowsversion(): N/A                                                                                                                                                            


--- check: package_management                                                                                                                                                                 
INFO: has conda-meta: False                                                                                                                                                                   
INFO: $VIRTUAL_ENV: None                                                                                                                                                                      


--- check: installed_packages                                                                                                                                                                 
INFO: installed: tensorboard==2.0.1                                                                                                                                                           
INFO: installed: tensorflow==2.0.0                                                                                                                                                            
INFO: installed: tensorflow-estimator==2.0.1                                                                                                                                                  


--- check: tensorboard_python_version                                                                                                                                                         
INFO: tensorboard.version.VERSION: '2.0.1'                                                                                                                                                    


--- check: tensorflow_python_version                                                                                                                                                          
/usr/lib/python3/dist-packages/requests/__init__.py:80: RequestsDependencyWarning: urllib3 (1.25.3) or chardet (3.0.4) doesn't match a supported version!                                     
  RequestsDependencyWarning)                                                                                                                                                                  
INFO: tensorflow.__version__: '2.0.0'                                                                                                                                                         
INFO: tensorflow.__git_version__: 'v2.0.0-rc2-26-g64c3d38'                                                                                                                                    


--- check: tensorboard_binary_path                                                                                                                                                            
INFO: which tensorboard: b'/home/bz/.local/bin/tensorboard\n'                                                                                                                                 


--- check: readable_fqdn                                                                                                                                                                      
INFO: socket.getfqdn(): 'master1.bz'                                                                                                                                                          


--- check: stat_tensorboardinfo                                                                                                                                                               
INFO: directory: /tmp/.tensorboard-info                                                                                                                                                       
INFO: os.stat(...): os.stat_result(st_mode=16895, st_ino=14562209, st_dev=2430, st_nlink=2, st_uid=1000, st_gid=1000, st_size=4096, st_atime=1572563590, st_mtime=1573247067, st_ctime=1573247
067)                                                                                                                                                                                          
INFO: mode: 0o40777                                                                                                                                                                           


--- check: source_trees_without_genfiles                                                                                                                                                      
INFO: tensorboard_roots (1): ['/home/bz/.local/lib/python3.6/site-packages']; bad_roots (0): []                                                                                     

--- check: full_pip_freeze                                                                                                                                                                    
INFO: pip freeze --all:                                                                                                                                                                       
absl-py==0.8.1                                                                                                                                                                                
asn1crypto==0.24.0                                                                                                                                                                            
astor==0.8.0                                                                                                                                                                                  
attrs==17.4.0                                                                                                                                                                                 
Automat==0.6.0                                                                                                                                                                                
bleach==2.1.2                                                                                                                                                                                 
cachetools==3.1.1                                                                                                                                                                             
certifi==2018.1.18                                                                                                                                                                            
chardet==3.0.4                                                                                                                                                                                
click==6.7                                                                                                                                                                                    
colorama==0.3.7                                                                                                                                                                               
command-not-found==0.3                                                                                                                                                                        
configobj==5.0.6                                                                                                                                                                              
constantly==15.1.0                                                                                                                                                                            
cryptography==2.1.4                                                                                                                                                                           
decorator==4.1.2                                                                                                                                                                              
distro-info===0.18ubuntu0.18.04.1                                                                                                                                                             
entrypoints==0.2.3.post1                                                                                                                                                                      
eventkit==0.8.5                                                                                                                                                                               
gast==0.2.2                                                                                                                                                                                   
google-auth==1.7.0                                                                                                                                                                            
google-auth-oauthlib==0.4.1                                                                                                                                                                   
google-pasta==0.1.8                                                                                                                                                                           
grpcio==1.25.0                                                                                                                                                                                
h5py==2.10.0                                                                                                                                                                                  
html5lib==0.999999999                                                                                                                                                                         
httplib2==0.9.2                                                                                                                                                                               
hyperlink==17.3.1                                                                                                                                                                             
ib-insync==0.9.53                                                                                                                                                                             
idna==2.6                                                                                                                                                                                     
incremental==16.10.1                                                                                                                                                                          
ipykernel==4.8.2                                                                                                                                                                              
ipython==5.5.0                                                                                                                                                                                
ipython-genutils==0.2.0                                                                                                                                                                       
ipywidgets==6.0.0                                                                                                                                                                             
Jinja2==2.10                                                                                                                                                                                  
joblib==0.14.0                                                                                                                                                                                
jsonschema==2.6.0                                                                                                                                                                             
jupyter-client==5.2.2                                                                                                                                                                         
jupyter-console==5.2.0                                                                                                                                                                        
jupyter-core==4.4.0                                                                                                                                                                           
Keras==2.3.1                                                                                                                                                                                  
Keras-Applications==1.0.8                                                                                                                                                                     
Keras-Preprocessing==1.1.0                                                                                                                                                                    
keyring==10.6.0                                                                                                                                                                               
keyrings.alt==3.0                                                                                                                                                                             
language-selector==0.1                                                                                                                                                                        
Markdown==3.1.1                                                                                                                                                                               
MarkupSafe==1.0                                                                                                                                                                               
mistune==0.8.3                                                                                                                                                                                
nbconvert==5.3.1                                                                                                                                                                              
nbformat==4.4.0                                                                                                                                                                               
nest-asyncio==1.0.0                                                                                                                                                                           
netifaces==0.10.4                                                                                                                                                                             
notebook==5.2.2                                                                                                                                                                               
numpy==1.17.3                                                                                                                                                                                 
oauthlib==3.1.0                                                                                                                                                                               
opt-einsum==3.1.0       
PAM==0.4.2                                                                                                                                                                                    
pandas==0.24.2                                                                                                                                                                                
pandocfilters==1.4.2                                                                                                                                                                          
pexpect==4.2.1                                                                                                                                                                                
pickleshare==0.7.4                                                                                                                                                                            
pip==19.3.1                                                                                                                                                                                   
prompt-toolkit==1.0.15                                                                                                                                                                        
protobuf==3.10.0                                                                                                                                                                              
pyasn1==0.4.2                                                                                                                                                                                 
pyasn1-modules==0.2.1                                                                                                                                                                         
pycrypto==2.6.1                                                                                                                                                                               
Pygments==2.2.0                                                                                                                                                                               
pygobject==3.26.1                                                                                                                                                                             
pyOpenSSL==17.5.0                                                                                                                                                                             
pyserial==3.4                                                                                                                                                                                 
python-apt==1.6.4                                                                                                                                                                             
python-dateutil==2.8.0                                                                                                                                                                        
python-debian==0.1.32                                                                                                                                                                         
pytz==2019.1                                                                                                                                                                                  
pyxdg==0.25                                                                                                                                                                                   
PyYAML==3.12                                                                                                                                                                                  
pyzmq==16.0.2                                                                                                                                                                                 
requests==2.18.4                                                                                                                                                                              
requests-oauthlib==1.3.0                                                                                                                                                                      
requests-unixsocket==0.1.5                                                                                                                                                                    
rsa==4.0                                                                                                                                                                                      
scikit-learn==0.21.3                                                                                                                                                                          
scipy==1.3.1                                                                                                                                                                                  
SecretStorage==2.3.1                                                                                                                                                                          
selenium==3.141.0                                                                                                                                                                             
service-identity==16.0.0                                                                                                                                                                      
setuptools==41.6.0                                                                                                                                                                            
simplegeneric==0.8.1                                                                                                                                                                          
six==1.13.0                                                                                                                                                                                   
sklearn==0.0                                                                                                                                                                                  
ssh-import-id==5.7                                                                                                                                                                            
systemd-python==234                                                                                                                                                                           
tdameritrade==0.0.7                                                                                                                                                                           
tensorboard==2.0.1                                                                                                                                                                            
tensorflow==2.0.0                                                                                                                                                                             
tensorflow-estimator==2.0.1                                                                                                                                                                   
termcolor==1.1.0                                                                                                                                                                              
terminado==0.7                                                                                                                                                                                
testpath==0.3.1                                                                                                                                                                               
tornado==4.5.3                                                                                                                                                                                
tqdm==4.32.2                                                                                                                                                                                  
traitlets==4.3.2                                                                                                                                                                              
Twisted==17.9.0                                                                                                                                                                               
ufw==0.36                                                                                                                                                                                     
unattended-upgrades==0.1                                                                                                                                                                      
urllib3==1.25.3                                                                                                                                                                               
vboxapi==1.0                                                                                                                                                                                  
wcwidth==0.1.7                                                                                                                                                                                
webencodings==0.5                                                                                                                                                                             
Werkzeug==0.16.0                                                                                                                                                                              
wheel==0.33.6                                                                                                                                                                                 
wrapt==1.11.2                                                                                                                                                                                 
zope.interface==4.3.2                                                                                                                                                                         
                                                                                                                                                                                              

For browser-related issues, please additionally specify:

  • Browser type and version (e.g., Chrome 64.0.3282.140):
  • Screenshot, if it’s a visual issue:

Issue description

I just upgraded tensorflow to 2.0. In training, I noticed tensorboard now has two runs for each experiment, including train and validation. However, only validation has scalar value curves. Train metric plots are always empty.

I can reproduce this issue by using the script in tensorboard get started guide: https://www.tensorflow.org/tensorboard/get_started. The script prints out reasonable train and val metrics as it should, but I’m just not getting the right plots. Screenshot from 2019-11-08 13-21-36

Issue Analytics

  • State:closed
  • Created 4 years ago
  • Reactions:8
  • Comments:10 (5 by maintainers)

github_iconTop GitHub Comments

17reactions
zzb3886commented, Nov 10, 2019

I tried this a few more times. It looks like tensorboard 2.0 has trouble updating the train metrics by itself. If I kill tensorboard and restart it, it will then show both train and validation metrics. If the training is still ongoing, the validation metrics will be updated where as the train metrics are stuck.

11reactions
zzb3886commented, Nov 15, 2019

Adding profile_batch=0 to the keras callback resolves it.

Read more comments on GitHub >

github_iconTop Results From Across the Web

TensorBoard Scalars: Logging training metrics in Keras
As training progresses, the Keras model will start logging data. TensorBoard will periodically refresh and show you your scalar metrics.
Read more >
ML Engine Experiment eval tf.summary.scalar not displaying ...
It's not evaluated in training mode because it's not upstream of the train_op in your graph, and even if it were evaluated, it...
Read more >
Display Deep Learning Model Training History in Keras
It records training metrics for each epoch. This includes the loss and the accuracy (for classification problems) and the loss and accuracy for ......
Read more >
Deep Dive Into TensorBoard: Tutorial With Examples
The Scalars tab shows changes in the loss and metrics over the epochs. It can be used to track other scalar values such...
Read more >
TensorBoard in 5 Minutes | Zac W. - Towards Data Science
I'm showing the scalars, graphs, distributions, histograms, ... For example, when your training metric keeps improving but there isn't an ...
Read more >

github_iconTop Related Medium Post

No results found

github_iconTop Related StackOverflow Question

No results found

github_iconTroubleshoot Live Code

Lightrun enables developers to add logs, metrics and snapshots to live code - no restarts or redeploys required.
Start Free

github_iconTop Related Reddit Thread

No results found

github_iconTop Related Hackernoon Post

No results found

github_iconTop Related Tweet

No results found

github_iconTop Related Dev.to Post

No results found

github_iconTop Related Hashnode Post

No results found