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TableCollection.sort and simplify no longer release GIL

See original GitHub issue

When changing the sort_tables and simplify_tables functions to be methods of the TableCollection object, I removed the complexity around dropping the GIL. This can be reinstated easily enough, but there are quite subtle issues around it so I didn’t want to do it in a hurry.

Is this still important to you @molpopgen?

Issue Analytics

  • State:closed
  • Created 5 years ago
  • Comments:5 (5 by maintainers)

github_iconTop GitHub Comments

1reaction
molpopgencommented, May 7, 2020

@jeromekelleher – we can close this (ancient) one.

0reactions
molpopgencommented, Jan 11, 2019

No–having the tskit API eventually separated out will allow one to do this on one’s own.

On Fri, Jan 11, 2019 at 9:11 AM Jerome Kelleher notifications@github.com wrote:

When changing the sort_tables and simplify_tables functions to be methods of the TableCollection object, I removed the complexity around dropping the GIL. This can be reinstated easily enough, but there are quite subtle issues around it so I didn’t want to do it in a hurry.

Is this still important to you @molpopgen https://github.com/molpopgen?

— You are receiving this because you were mentioned. Reply to this email directly, view it on GitHub https://github.com/tskit-dev/tskit/issues/70, or mute the thread https://github.com/notifications/unsubscribe-auth/AGHnH4EuqkrOoR1r2u4if_Wyfn4PXPYtks5vCMWIgaJpZM4Z72RQ .

On Fri, Jan 11, 2019 at 9:11 AM Jerome Kelleher notifications@github.com wrote:

When changing the sort_tables and simplify_tables functions to be methods of the TableCollection object, I removed the complexity around dropping the GIL. This can be reinstated easily enough, but there are quite subtle issues around it so I didn’t want to do it in a hurry.

Is this still important to you @molpopgen https://github.com/molpopgen?

— You are receiving this because you were mentioned. Reply to this email directly, view it on GitHub https://github.com/tskit-dev/tskit/issues/70, or mute the thread https://github.com/notifications/unsubscribe-auth/AGHnH4EuqkrOoR1r2u4if_Wyfn4PXPYtks5vCMWIgaJpZM4Z72RQ .

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