shebang of average_nucleotide_identity.py seems to be subjective

Just a minor issue: I just installed the current version of pyani via pip. This version includes this shebang, which seems to point to a developers subjective python location: #!/Users/lpritc/Development/GitHub/pyani/venv-pyani/bin/python

Maybe this should be changed to the more generally applicable #!/usr/bin/env python or simply left out completely?

pyani Version: pyani-0.2.2

Python Version: 3.5.2

Operating System: Red Hat Linux

[widdowquinn]

Thanks for spotting and raising that!

It’s correct in the source: https://github.com/widdowquinn/pyani/blob/master/bin/average_nucleotide_identity.py and in the .tar.gz source download

Creation of the .egg for distribution appears to have substituted the path that you see. I’ll get a corrected version out ASAP.

[widdowquinn]

I agree that it’s not an unresolvable issue for those familiar with the command-line and Python interpreter errors 😉

Using python average_nucleotide_identity.py obviously works if you’re in a directory with average_nucleotide_identity.py in it, but I’m hoping that publishing it as a script will enable even those who don’t realise such a thing is possible to use it.