question-mark
Stuck on an issue?

Lightrun Answers was designed to reduce the constant googling that comes with debugging 3rd party libraries. It collects links to all the places you might be looking at while hunting down a tough bug.

And, if you’re still stuck at the end, we’re happy to hop on a call to see how we can help out.

Refresh Organization fails once a .dockstore.yml workflow is reached

See original GitHub issue

Describe the bug If you’ve registered/migrated a workflow using github apps, doing a Refresh Organization will fail once it gets to that workflow. To Reproduce Steps to reproduce the behavior:

  1. Have at least one .dockstore.yml workflow in an organization
  2. Click on Refresh Organization
  3. See that once it reaches the .dockstore.yml workflow, the call fails and stops.

Expected behavior It should skip over any .dockstore.yml workflows and continue to refresh the others.

Additional context Webservice

  • c354528

UI

  • 2.6.1-38-gdf02f7cf

Compose Setup

  • 8c083bddfa2e8cfcb517792d45b03b95dc3dda5d

Deploy

  • 1.9.2-21-gd87bd60

┆Issue is synchronized with this Jira Story ┆fixVersions: Dockstore 1.11.X ┆friendlyId: DOCK-1583 ┆sprint: Sprint 72-Yellowspotted Catsha ┆taskType: Story

Issue Analytics

  • State:closed
  • Created 3 years ago
  • Comments:6 (2 by maintainers)

github_iconTop GitHub Comments

2reactions
garyluucommented, Sep 28, 2021

tested this on dev, the error appears and continues to refresh

0reactions
NatalieEOcommented, Jan 25, 2022

Refreshing the org does correctly skip over .dockstore.yml workflows. No errors. Webservice - 83de67a

UI - 2.8.4-119-g3e14769a

Compose Setup - 5454f4a

Deploy - 1.11.3-113-g920b171

galaxyParsingLambdaVersion: 0.0.6

Read more comments on GitHub >

github_iconTop Results From Across the Web

Cannot refresh .dockstore.yml workflows
When I attempt to refresh my organization, I continually get the following error: warning The webservice encountered an…
Read more >
Refresh organization with GitHub App workflows - confusing 400 ...
When refreshing an org with a GitHub App (.dockstore.yml) workflow, the user gets a red 400 error notification. ... The notification is red,...
Read more >
Galaxy-Training-Network/Lobby
We'd need someone with access to the repo and a Dockstore account to install the GitHub App. After that, any push or release...
Read more >
Bioconductor 3.15 Released
ASURAT ASURAT is a software for single-cell data analysis. Using ASURAT, one can simultaneously perform unsupervised clustering and biological ...
Read more >
git - Github Actions Failing
github/workflows/dev.yml file or in DockerFile. But, suddenly in recent pushes, my Github Actions fail with the error. Setup, Build, Publish, ...
Read more >

github_iconTop Related Medium Post

No results found

github_iconTop Related StackOverflow Question

No results found

github_iconTroubleshoot Live Code

Lightrun enables developers to add logs, metrics and snapshots to live code - no restarts or redeploys required.
Start Free

github_iconTop Related Reddit Thread

No results found

github_iconTop Related Hackernoon Post

No results found

github_iconTop Related Tweet

No results found

github_iconTop Related Dev.to Post

No results found

github_iconTop Related Hashnode Post

No results found