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What model is needed for regression_data in esm.pretrained.load_model_and_alphabet_local？

See original GitHub issue

Bug description Use esm.pretrained.load_model_and_alphabet_local( ‘esm1_t12_85M_UR50S.pt’), i need to load esm1_t12_85M_UR50S-contact-regression.pt, but in fact this is not provided.

Logs

Output goes here

Additional context If you want to load the local esm model, besides the esm1_t12_85M_UR50S.pt you provided, do you need any regression model? What is the meaning of regression_data in your code esm.pretrained.load_model_and_alphabet_local .

Issue Analytics

State:
Created 2 years ago
Comments:8 (4 by maintainers)

Top GitHub Comments

1reaction

Mountain-Whitecommented, Aug 3, 2021

@Mountain-White esm-1v does not have contact-regression.pt because it is not optimal for that task (rather it is best for variant prediction). Does that answer your question?

thx ,the problem is solved.

0reactions

tomsercucommented, Aug 2, 2021

@Mountain-White esm-1v does not have contact-regression.pt because it is not optimal for that task (rather it is best for variant prediction). Does that answer your question?

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